Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3440 ATGAAGTTCATTAACCCTAAAAACCTCTCTCCCAAACGCCTCTTCCGTTCCAAGAAGGAAAAATCCTCCGTATCAAGATCCGACCCACCTTCTTTCGGGTCAGCTTCTTCCTCCGATGAATCCACTCACAACAAACCTATCACCGGTGGCTCTCAAACTCCCACCAGCGTTCTTCCTGAAGTCTCCGGTGACTGGTCAGATATCACCGTCGATGTACGTTGGGAGCTAGCTCAAGCTTTTCGTTTAATCGATCGCGACAACGACGGCGTCGTTTCGCGTGAAGAACTTGAAGCGGTTCTCACGCGCCTTGGAGCGCGTCCTCCGAGTCGAGAAGAGATCGCTTTAATGCTAAGCGAAGTTGATAGCGATGGACGAGGTTGCATAAGCATTGAAACGATCATGAACCGGGTTGGATCCGGTTCGGAACCGAACCACGAGGAAGAGTTGAGAGAAGCGTTTGAGGTTTTTGATACGGATCGGGATGGGAGAATATCAGCGGAGGAGTTGTTGAGGGTTTTTAGAGCGATTGGTGATGAACGGTGCACGTTAGAGGAATGTCAGCGTATGATAGCAGGTGTTGATAAAAACGGGGATGGGTTTGTTTGTTTTGAGGAGTTTTCTCTTATGATGGACTTGCAGCGATGA 645 0.4915 MKFINPKNLSPKRLFRSKKEKSSVSRSDPPSFGSASSSDESTHNKPITGGSQTPTSVLPEVSGDWSDITVDVRWELAQAFRLIDRDNDGVVSREELEAVLTRLGARPPSREEIALMLSEVDSDGRGCISIETIMNRVGSGSEPNHEEELREAFEVFDTDRDGRISAEELLRVFRAIGDERCTLEECQRMIAGVDKNGDGFVCFEEFSLMMDLQR* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3440 214 MobiDBLite consensus disorder prediction 1 62 - -
Mal3g3440 214 CDD EFh 148 210 IPR002048 GO:0005509
Mal3g3440 214 Gene3D - 140 214 - -
Mal3g3440 214 ProSiteProfiles EF-hand calcium-binding domain profile. 75 106 IPR002048 GO:0005509
Mal3g3440 214 PANTHER CALCIUM-BINDING PROTEIN CML35-RELATED 7 212 - -
Mal3g3440 214 ProSitePatterns EF-hand calcium-binding domain. 84 96 IPR018247 -
Mal3g3440 214 Gene3D - 69 139 - -
Mal3g3440 214 Pfam EF-hand domain pair 146 209 IPR002048 GO:0005509
Mal3g3440 214 Pfam EF-hand domain pair 76 131 IPR002048 GO:0005509
Mal3g3440 214 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 7 212 - -
Mal3g3440 214 ProSiteProfiles EF-hand calcium-binding domain profile. 144 179 IPR002048 GO:0005509
Mal3g3440 214 ProSiteProfiles EF-hand calcium-binding domain profile. 181 214 IPR002048 GO:0005509
Mal3g3440 214 SMART efh_1 112 140 IPR002048 GO:0005509
Mal3g3440 214 SMART efh_1 185 213 IPR002048 GO:0005509
Mal3g3440 214 SMART efh_1 148 176 IPR002048 GO:0005509
Mal3g3440 214 SMART efh_1 75 103 IPR002048 GO:0005509
Mal3g3440 214 ProSitePatterns EF-hand calcium-binding domain. 194 206 IPR018247 -
Mal3g3440 214 CDD EFh 75 131 IPR002048 GO:0005509
Mal3g3440 214 ProSitePatterns EF-hand calcium-binding domain. 157 169 IPR018247 -
Mal3g3440 214 SUPERFAMILY EF-hand 64 210 IPR011992 -
Mal3g3440 214 MobiDBLite consensus disorder prediction 26 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3440 Mal-Chr3 111354094 111354738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3440 8 214 EF-hand Containing Proteins AT3G10190 54.502 1.47e-65 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3440 K13448 - gmx:100815559 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3440 3 111354094 111354738 Mal3g3440 3 111354094 111354738 ECH