Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3429 ATGGCTGTGATGAGTAGTTTCAGAAGCGTTCTTACTTCCAAATCGAGGTCACTCAACAAATGGTGCCGTTCACCGTCGTTCTCCTCCACCTCCTCCGCCGCAGCGGTGGTCGCTGAAGATAGCACTTATTTGAAAGATTATGCTGATTATAGAAGATCTCTTTACGGTAACATCACTCATAAAGCTCTTCTTGTTGATGCTGTTGGTACTCTCGTTATTCCTTCTCAACCCATGGCTCAGATATATAGAAGCATTGGGGAGAAATATGGTGTGAATTATTCAGAGGAAGAGATTTTGCATAGATACAGAAGAGCTTATAGTCAGCCTTGGGGTAAATCTCGTCTCAGATATGTTAACGATGGTAGACCTTTCTGGCAATACATAGTTAGTAATTCTACTGGCTGTTCTGATTCTCAATACTTTGAGGAGCTTTATAATTATTATATGACAGACAAGGCATGGCACCTATGTGACCCTAATGCAGAACAAGTGTTCAAAGCTCTTAGAAAATCAGGTGTGAAATTGGCTGTTGTGTCAAATTTTGACACTCGGTTAAGACCTCTCTTGCGGGCATTAAACTGTGATGATTGGTTTGATGCTGTAGCAGTATCAGCTGAGGTTGAAGCAGAGAAACCAAATCCAACTATATTTCTTAAAGCGTGTGAACTATTGGATGTAAAACCTGAGGATGCTGTTCATGTTGGGGATGATCGTCGAAATGATTTATGGGGTGCTAGAGATGCAGGCTGTGATGCTTGGCTTTGGGGAAGTGATGTTCACTCTTTTAAGGAGGTAGCGCAGAGGATTGGGGTCCAGGTCTGA 822 0.4246 MAVMSSFRSVLTSKSRSLNKWCRSPSFSSTSSAAAVVAEDSTYLKDYADYRRSLYGNITHKALLVDAVGTLVIPSQPMAQIYRSIGEKYGVNYSEEEILHRYRRAYSQPWGKSRLRYVNDGRPFWQYIVSNSTGCSDSQYFEELYNYYMTDKAWHLCDPNAEQVFKALRKSGVKLAVVSNFDTRLRPLLRALNCDDWFDAVAVSAEVEAEKPNPTIFLKACELLDVKPEDAVHVGDDRRNDLWGARDAGCDAWLWGSDVHSFKEVAQRIGVQV* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3429 273 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 22 273 - -
Mal3g3429 273 SFLD Haloacid Dehalogenase 61 255 - -
Mal3g3429 273 PANTHER - 22 273 - -
Mal3g3429 273 TIGRFAM HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 169 249 IPR006439 -
Mal3g3429 273 Gene3D - 65 257 IPR023214 -
Mal3g3429 273 Pfam Haloacid dehalogenase-like hydrolase 69 252 IPR041492 -
Mal3g3429 273 Gene3D - 76 149 IPR044924 -
Mal3g3429 273 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 61 255 - -
Mal3g3429 273 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 60 71 IPR006439 -
Mal3g3429 273 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 216 236 IPR006439 -
Mal3g3429 273 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 168 181 IPR006439 -
Mal3g3429 273 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 198 214 IPR006439 -
Mal3g3429 273 SUPERFAMILY HAD-like 61 264 IPR036412 -
Mal3g3429 273 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 151 251 IPR006439 -
Mal3g3429 273 CDD HAD_dREG-2_like 161 272 - -
Mal3g3429 273 TIGRFAM DREG-2: HAD hydrolase, REG-2-like, family IA 61 254 IPR011949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3429 Mal-Chr3 111192459 111197012 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3429 - - adu:107492671 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3429 3 111192459 111197012 Mal3g3429 3 111192459 111197012 ECH