Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3412 ATGATAAAAATGGATACTTTACTCAAAACACCAAACAAGCTTCAATTTTTGCACCCACTTCATGGTTATTCAGAAAAATTGAGTCATTTTTCAGCTAAGTTGCAAACCCATGAACTTAGATTTGGTTCAAAGAAAAAACCAGTTTTGAGGGCTAGTAGCAGTACCCTTTTGGAGCTTGTTCCTGAATTCAAGAAGGAAAATTTGGATTTTGAACTTCCTTTGTTTGATTCAACAAAGGGAACTGTTGTGGATCTTGTAGTTGTGGGAGGTGGTCCTGCAGGACTTGCTGTAGCACAGCAAGTTTCTGAAGCAGGGCTTTCTGTTTGTGCTATTGATCCAAACCCTAGATTGATTTGGCCTAATAATTATGGTGTTTGGGTGGATGAATTTGAAGCAATGGATTTGCTTGATTGTCTTGATAAAACTTGGTCTGGCGCTGTTGTTTATATTGACGATAAGACGAAAAAGGATTTAGATAGGCCTTATGGTAGGGTTAATAGGAAGCTTTTGAAGTCGAAGATGCTACAGAAATGCATATCGAATGGTGTTAAGTTTCACCAAGCTAAAGTTATCAAGGTCATTCATGAGGAATCTAAATCGATGTTGATTTGTAACGACGGTGTTACGGTTCAGGCTACTGTTGTTCTTGATGCTACTGGCTTTTCGAGATGTCTGGTTCAGTATGATAAACCATATAATCCGGGTTACCAGGTTGCGTACGGGATTTTGGCCGAGGTGGATGAACATCCATTTGATGTTGATAAAATGCTTTTTATGGATTGGAGAGATTCGCATCTAGACAATGACATGAAGCTCAAGGAGAGAAATAGTAAAATACCTACATTTCTGTATGCAATGCCTTTTTCGTCAACCAAGATATTTCTCGAAGAAACCTCTCTTGTAGCGCGCCCTGGGTTACGGATGGATGATATACAGGACAGAATGGTTGCAAGGTTGAAACATTTGGGGATTAATGTGAAAAGCATTGAAGAAGATGAGCAGTGTGTCATTCCCATGGGTGGCCCTCTCCCAGTTCTCCCTCAGAGAGTTGTTGGAATCGGCGGTACAGCTGGGATGGTGCATCCTTCAACTGGGTATATGGTAGCAAGGACCCTTGCTGCAGCTCCTATTGTTGCTAATGCTATTGTTCAATATCTTGGTTCTGATAGAGGCCTTTTAGGAGACGAAGTATCTGCACGAGTATGGAAAGACTTATGGCCAATCGAAAGGAGACGACAAAGGGAGTTCTTCTGTTTTGGTATGGACGTCTTACTCAAGCTTGATTTACCTGGCACAAGGAGATTTTTCGATGCATTTTTTAATCTGGAACCTCATTATTGGCATGGATTCTTATCATCAAGATTGTATCTTCCTGAGCTCTTTACTTTTGGGTTGTCTCTATTTTCTTATGCTTCAAATACATCTAGGCTAGAGATAATGGCTAAGGGAACTCTTCCTTTGGTAAATATGGTCAACAACTTGATACAAGATAAAGAATAA 1500 0.4013 MIKMDTLLKTPNKLQFLHPLHGYSEKLSHFSAKLQTHELRFGSKKKPVLRASSSTLLELVPEFKKENLDFELPLFDSTKGTVVDLVVVGGGPAGLAVAQQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDKTWSGAVVYIDDKTKKDLDRPYGRVNRKLLKSKMLQKCISNGVKFHQAKVIKVIHEESKSMLICNDGVTVQATVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVDEHPFDVDKMLFMDWRDSHLDNDMKLKERNSKIPTFLYAMPFSSTKIFLEETSLVARPGLRMDDIQDRMVARLKHLGINVKSIEEDEQCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVQYLGSDRGLLGDEVSARVWKDLWPIERRRQREFFCFGMDVLLKLDLPGTRRFFDAFFNLEPHYWHGFLSSRLYLPELFTFGLSLFSYASNTSRLEIMAKGTLPLVNMVNNLIQDKE* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3412 499 SUPERFAMILY FAD/NAD(P)-binding domain 82 465 IPR036188 -
Mal3g3412 499 PANTHER LYCOPENE BETA CYCLASE, CHLOROPLASTIC 9 499 - -
Mal3g3412 499 TIGRFAM carotene-cycl: lycopene cyclase family protein 84 479 IPR010108 GO:0016117|GO:0016705
Mal3g3412 499 Pfam Lycopene cyclase protein 84 476 - -
Mal3g3412 499 PANTHER UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL 9 499 - -
Mal3g3412 499 Gene3D - 80 422 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3412 Mal-Chr3 110986893 110988392 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3412 K06443 - gmx:100810895 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3412 3 110986893 110988392 Mal3g3412 3 110986893 110988392 ECH