Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3397 ATGGACACCAATAGCACAAGTAGCACCAGTTCAGTCATTAGTACGGTCCAACAAAGAACACCAACAAAAATAACCAAACCCAAGAAGAAAAAGAACACCACCAACAACAACAAACCTATCAAGGTAGTCTACATATCCAACCCTATGAAGGTTAAGACCAGTGCCTCGGAGTTTAGGGCACTGGTCCAAGAACTCACCGGTCAGTACGCTGAATCGCCGCCAGATCCTTCCAGGTTTCAGGAGTTCGGCGTCGATGATAGCGGTACTGACCGGCTTGGATGTGAGAATATGATTGATTGTGATAAAATTGATCAAACAGTTGTGGGGGTGCCTCCTCTTGTGGATTCTGATGATAAAGTGAAACCTAGTGAAGGCTCATCAAATGAGAGTTATTTTGAGGGTTTTGATGAAGATGTGCTTTTGACGCCTGAAATGGTGGATAACATTTGGGATCTGCTTCCTACAAGTGCATTCTATGAATCTTTCCAACTTGATAGCTACTGA 504 0.4365 MDTNSTSSTSSVISTVQQRTPTKITKPKKKKNTTNNNKPIKVVYISNPMKVKTSASEFRALVQELTGQYAESPPDPSRFQEFGVDDSGTDRLGCENMIDCDKIDQTVVGVPPLVDSDDKVKPSEGSSNESYFEGFDEDVLLTPEMVDNIWDLLPTSAFYESFQLDSY* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3397 167 MobiDBLite consensus disorder prediction 1 22 - -
Mal3g3397 167 PANTHER SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC 15 161 IPR039335 GO:0051091
Mal3g3397 167 MobiDBLite consensus disorder prediction 1 39 - -
Mal3g3397 167 Pfam VQ motif 45 70 IPR008889 -
Mal3g3397 167 PANTHER SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC 15 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3397 Mal-Chr3 110743749 110744252 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3397 - - mtr:MTR_7g089860 233.417