Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3372 ATGCAGAAAATAGCGCGAAGGGTGCGATTCTTGAATCCAAACTTGGTGCAATCGCAACTTGCTTCGTGGATTTCAAACCCTTCTACCACTCATACAAATCCACAATTTTCATCTTATGGTGCCATCGATAAAACTCGCAGTGTTGAATCTCTCGATTTTCGGGAAAGTACAAACACAAGAGAACTTAGGAATGCATTTGACAAATACAATAGAAACGTTTTGTCTCGATGCCTGAACTGGAGAAATGATAATCATCATGCTGCCAGCTATGTGGTAAACCGTCATTTTAGAGCTGATAACAATGGTAGATGCACAAAGGAGTTCTCAAGCAAGCTTCGTAAAAATATTCCAGACTTTGTAAAGATAGTAGAGGTTGGTGCAAGAGATGGCTTGCAAAATGAGAAGGTTATTGTTCCCACTGATGTGAAAATTGAATTGATAAAACTGCTAGTTTCTTCTGGGTTGTCTGTTGTTGAGGCGACAAGTTTTGTCTCACCAAAATGGGTGCCACAGTTGGCAGATGCAAAGGATGTATTGGCAGCAATTCGAGACGTTGAAGGTGCTAGTTTTCCTGTCTTAACTCCAAATCTCAAAGGTTTTGAGGCAGCTGTTGCTGCTGGAGCTAAGGAAGTGGCTGTTTTTCCTGCTGCTTCTGAATCATTCTCTAAAGCAAATCTCAACTGTGGCATTGAGGATAACCTTGCTCGTTGCCGTGATATTGCTTCAGCTTCTAAAAGCCTCACAATCCCAGTTCGTGGATACATATCATGTGTTGTGGGATGTCCTCTGGAAGGAAAAATTGCTCCAGCAAAAGTAGCATACGTTGCAAAATCACTTTATGAGATGGGGATCTCAGAGATTTCATTAGGGGATACAATTGGTGTTGGTACACCGGGTACCGTCATTCCTATGCTTGAAGCTGTTCTTGATGTCGTTCCAATTGACAAGCTTGCTGTCCACTTTCATGATACTTATGGTCAGGCACTTTCAAATATTCTAATTTCACTACAGATGGGGATCAGTACAGTGGATTCATCTGTCTCTGGTCTTGGAGGTTGTCCATATGCCAAGGGTGCAACTGGGAATGTTGCCACTGAGGATGTTGTTTATATGCTGAATGGACTTGGTGTTAAAACTAATGTGGACCTTGGAAAACTTATGCTTGCTGGGGATTTCATCTGCAAGCATTTAGGACGTGCTACTGGTTCAAAAGCTGCAAGTGCATTGAATAAAGTTACAAATATTGCCTCCAAACTGTGA 1260 0.4183 MQKIARRVRFLNPNLVQSQLASWISNPSTTHTNPQFSSYGAIDKTRSVESLDFRESTNTRELRNAFDKYNRNVLSRCLNWRNDNHHAASYVVNRHFRADNNGRCTKEFSSKLRKNIPDFVKIVEVGARDGLQNEKVIVPTDVKIELIKLLVSSGLSVVEATSFVSPKWVPQLADAKDVLAAIRDVEGASFPVLTPNLKGFEAAVAAGAKEVAVFPAASESFSKANLNCGIEDNLARCRDIASASKSLTIPVRGYISCVVGCPLEGKIAPAKVAYVAKSLYEMGISEISLGDTIGVGTPGTVIPMLEAVLDVVPIDKLAVHFHDTYGQALSNILISLQMGISTVDSSVSGLGGCPYAKGATGNVATEDVVYMLNGLGVKTNVDLGKLMLAGDFICKHLGRATGSKAASALNKVTNIASKL* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3372 419 Gene3D Aldolase class I 113 412 IPR013785 -
Mal3g3372 419 Pfam HMGL-like 120 392 IPR000891 GO:0003824
Mal3g3372 419 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 45 419 - -
Mal3g3372 419 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 45 419 IPR043594 GO:0016833
Mal3g3372 419 SUPERFAMILY Aldolase 116 403 - -
Mal3g3372 419 CDD DRE_TIM_HMGL 122 395 - -
Mal3g3372 419 ProSiteProfiles Pyruvate carboxyltransferase domain. 120 387 IPR000891 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3372 Mal-Chr3 110286687 110294269 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3372 K01640 - gmx:100801507 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3372 3 110286687 110294269 Mal3g3372 3 110286687 110294269 ECH