Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3350 ATGGATTCATCGTTGGTCTCCAACAACGATGTTGCTTCTGGGTTTGTTAAGGAGTCAATGGTTGACCCTTTTTTGGTTGAGGCTCTTCAGAATCCTCGCCATCGTCTAACAATTCTGCGGATGGAGCTGGATATCCAGAAATTTATGAACAGTGCTGATCAGCAGCATTTTGAGTTTCAACATTTCCCTTCTTCTTATCTCCGACTGGCTGCACATCGTGTTGCTCAACACTATGGTATGCAAACAATGGTTCAAGATATTGGCTTAGATGGCCAGAGTAAAATTCTGGTCAGAAAGTTACCCGAAAGCAAGTGTCCTGTGGTTCGCTTATCTGAAATATCTGCAAAACAGTTGGACAATGAGAAATCCGAGCAGAAAAAAATTGTCATTCGATCTAGGCCTCAGAAAACTAGTTTGAATGGAGCCAATGATTCCGCAAAAAAAGGAAACCCTCTGAGAAGTGTGGAAGAGAGGAAGGAGGAGTATGATCGGGCAAGAGCACGTATCTTCAATGGCTCTACAAGCTTTGATTCAGTTGACACCTCATCCATGGTCCCAATAGATGGGAAAAATTCTTTTATGAGCAAGGATGAGAGTGAAACTAGCAAAATCCCCATGGCTGATTCAGAAAGATTTTTTGGTGTCAGGGATAATAGTTATCCTCGAGTTGCCATTATCAGAGATAGGGAAAAGGATCGAAGTGATCCAGATTATGATCGTAGCTATGGAAGGAGTTTATCAGCCTCTGCTGTTAACTTGGTGCCTTTTAATTTGCCAAAAGCTCAACCTTCATTTGCTCCGTATGAAACTACTTTTAATCAGTTGGGTCAGATGCCACAAGCTCAAGCTGCACTTGGATATGGACCTCCTTCAACCCCGATAATGAGTCCTTTTTGTACCCCGGGATTGAACCCGGCATCTGGGGATGGTGCTTACCTACAGTGGCCAAGTCCTACAATGATGTATGCACATTCATATGACCAATTTAGACATGCTGTTTACCAGGCTCCATTTGGTCAACCGTTGAGCTTTGACTATTCACAGAACTATTAG 1053 0.4292 MDSSLVSNNDVASGFVKESMVDPFLVEALQNPRHRLTILRMELDIQKFMNSADQQHFEFQHFPSSYLRLAAHRVAQHYGMQTMVQDIGLDGQSKILVRKLPESKCPVVRLSEISAKQLDNEKSEQKKIVIRSRPQKTSLNGANDSAKKGNPLRSVEERKEEYDRARARIFNGSTSFDSVDTSSMVPIDGKNSFMSKDESETSKIPMADSERFFGVRDNSYPRVAIIRDREKDRSDPDYDRSYGRSLSASAVNLVPFNLPKAQPSFAPYETTFNQLGQMPQAQAALGYGPPSTPIMSPFCTPGLNPASGDGAYLQWPSPTMMYAHSYDQFRHAVYQAPFGQPLSFDYSQNY* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3350 350 MobiDBLite consensus disorder prediction 121 157 - -
Mal3g3350 350 MobiDBLite consensus disorder prediction 132 147 - -
Mal3g3350 350 CDD R3H_encore_like 34 99 - -
Mal3g3350 350 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 16 349 - -
Mal3g3350 350 SUPERFAMILY R3H domain 19 122 IPR036867 GO:0003676
Mal3g3350 350 PANTHER OS05G0411600 PROTEIN 16 349 - -
Mal3g3350 350 Pfam SUZ domain 124 173 IPR024771 -
Mal3g3350 350 Pfam R3H domain 37 87 IPR001374 GO:0003676
Mal3g3350 350 Gene3D - 16 135 IPR036867 GO:0003676
Mal3g3350 350 ProSiteProfiles R3H domain profile. 35 101 IPR001374 GO:0003676
Mal3g3350 350 SMART R3H_4 19 100 IPR001374 GO:0003676
Mal3g3350 350 ProSiteProfiles SUZ domain profile. 104 174 IPR024771 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3350 Mal-Chr3 109929331 109934416 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3350 - - gmx:100814835 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3350 3 109929331 109934416 Mal3g3350 3 109929331 109934416 ECH