Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3341 ATGGCAGAGGTTTCGATGTGTTACAGCAACAGTTCAGAGCTGAGTCCAGATGAAGAGAGAATCATGATCAAAGACATTGCTCTTTCTTCTCAAACTAATACCAAAGAAGGCGACACCTTCTTCATCATCACTCAGAGATGGTGGCAACATTGGATTGAATATGTGAACCAAGACCAGACAAACCCTTCTTATGATGGATCTTCCTTTCCTGAACATAGCGATTTGGCCAGTTCAAGTGCTTTAAAGAGGCCTGCTGGTATTGATAATTATGATTTGATCGATAATACTGGACCAGAGGACTCTAGTACGGGTATTGAAATTCATGATACGCTTTTAGAAGGGCGTGACTATGTATTACTTCCTCAAGAGGTTTGGAACCAATTATTTAAATGGTATGGTGGTGGACCTACATTGGAGAGGAAAGTTATTACTTCAGGTCTTTCCCAGACAGAATTTGCAGTAGAGGTGTATCCTTTACGGCTTCAATTACTTGTGTTGCCAAGGAATGTTCGATCTACTATAAGGATAAGCAAGAAGGAAACCGTTGGACAGCTACACAAAAAAGCTTGTGAAATATTCGATCTTCTGTTGGACCAGGTGCGCATTTGGGATTACTATGGCCATCGGAAGCATGCCTTGATGAATGACATGGACAAAACTCTAGATGATGTCAATCTACAAATGGACCAAGATATTCTTGTTGAGGTCGTAAACAATACAAGTTCTGCTCAAGAAAATGGATCAGCACATAGGGACGCGAATTCTGTTCTTGTGGAGCCCACAAAATCAAGCGTATTGACCGCTGGTGGCCTGTCTACTAGCAAGGGTGCATCTAGAGGCAACAATATCGAACATTATTCATCTCAGAAACTAAATTCTCCGGTCAGAGATTCAGAAAACCCTTATGGAACTCTTGGTGTCACCACAAGAGGTTCATTCGGTGGTCTCACTGGATTGCTAAATCTTGGCAATACTTGTTTCATGAATAGTGCAATACAGTGCCTTGTTCATACACCAGAATTTGCTAGGTACTTTAGGGAGGACTATCACCAAGAGATAAATTGGCAAAATCCACTCGGCATGGTTGGTGAACTAGCCCTAGCATTTGGCGAGTTGCTTCGAAAACTATGGGCACCTGGGCGAACACCAATTGCTCCTCGCCCTTTTAAAGCAAAGCTTGCTCGTTTTGCACCTCAGTTCAGCGGGCACAACCAACATGATTCCCAGGAGCTCTTAGCTTTTCTGCTGGATGGTCTCCATGAAGACTTAAATCGTGTAAAGCACAAACCATATATAAAGTCTCGAGATGCTGATGGCCGACCTGATGAAGAAGTGGCTGATGAGTATTGGGCAAATCATATTGCTCGTAATGATTCCATAATTGTTGATGTGTGCCAGGGACAATACAAGTCGACTTTAGTTTGTCCAGTTTGCAACAAAGTCTCTGTCACATTTGATCCTTTCATGTACCTTTCCCTGCCCCTCCAGTCCACCACCAATAGGACCATGACAGTGACAGTTTTTAGTTGCGACACTACTACCCTGCCATCGCCGTGTACAGTAACTGTGCCCAAGCAGGGACGTTGCAGAGATCTTATACAAGCACTTAGCAATGCTTGCTCATTGAAGCATAACGAGAGGATAGTGCTTGTGGAGATACGAAACCATTTGATCCATAGATTTTTCGAAGATCCTCTTCAATTGTTGTCCTCAATTAAAGATGATGATCGTCTTGCCGCTTACAAGATTACAAAGATGGACAAAAACACAAAGTACCTCCAGTTGATACATCGCCGCAGAGAGCAGAGTAGTGACTCACATACCATTTCAGGATGGAAACCATATGGAACACCTATTGTTTCATTGATCTCATGTGATGATACAATCACAAGAGGTGACATACAAGTAATAGTTAATCGTATACTCTCTCCTTTTCTGTTGAAAGGTGGCAATGCACAGCAAGCTGCTTCTGCTGAAACCAATGTGGTGTCAAATTCAATAAACAAGGATGATACTGTTTCAAAGGCGACACATGTACCAACATTACCTCTACTATTGGTAGATGATAACAATGCTTGCATTGATCTTTCAATGGGAGAGGAGAAAGTAGTTAAACTGTCACCGTCATCAGCTAGAGTTCTAGTGTATATTGATTGGTCACAAAAGCTTCTGGAAAAGTATGATACTTATCCACTTGAGACTTTGCCAGAAGTTTTGAAATATGGACCTGTAACCAAGAAAGCTCGTACTGAACCTCTCTCATTGTACACTTGCTTGGAAGCTTTTCTGCGTGAAGAACCATTGGTTCCTGAAGATATGTGGTACTGTCCTAAATGTAAAGAGAGACGGCAAGCAAGCAAAAAGCTTGATCTATGGAGGCTCCCAGAGGTTTTGGTCATTCATTTAAAGAGGTTCTCATATAGCAGGTCAATGAAGCATAAACTAGAGACTTTTGTTAACTTTCCCATTCATGATTTTGACTTAACAAATTACATAGCCAACAAAAACAACTCGCGGCGTCAAGTATATGAACTCTATGCCCTTACAAATCATTATGGTAGTATGGGTAGTGGACATTATACCGCACATATTAAGCTCTTAGACGAAAACAGGTGGTACAATTTTGATGATAGCCACATATCACTCATAAGTGAAGACGAGGTTAATACTGCTGCCGCCTATGTTCTGTTTTACCGGAGGGTGAAAACTGACGATGACATTGTAAGCAATGGGGCTTAG 2739 0.4177 MAEVSMCYSNSSELSPDEERIMIKDIALSSQTNTKEGDTFFIITQRWWQHWIEYVNQDQTNPSYDGSSFPEHSDLASSSALKRPAGIDNYDLIDNTGPEDSSTGIEIHDTLLEGRDYVLLPQEVWNQLFKWYGGGPTLERKVITSGLSQTEFAVEVYPLRLQLLVLPRNVRSTIRISKKETVGQLHKKACEIFDLLLDQVRIWDYYGHRKHALMNDMDKTLDDVNLQMDQDILVEVVNNTSSAQENGSAHRDANSVLVEPTKSSVLTAGGLSTSKGASRGNNIEHYSSQKLNSPVRDSENPYGTLGVTTRGSFGGLTGLLNLGNTCFMNSAIQCLVHTPEFARYFREDYHQEINWQNPLGMVGELALAFGELLRKLWAPGRTPIAPRPFKAKLARFAPQFSGHNQHDSQELLAFLLDGLHEDLNRVKHKPYIKSRDADGRPDEEVADEYWANHIARNDSIIVDVCQGQYKSTLVCPVCNKVSVTFDPFMYLSLPLQSTTNRTMTVTVFSCDTTTLPSPCTVTVPKQGRCRDLIQALSNACSLKHNERIVLVEIRNHLIHRFFEDPLQLLSSIKDDDRLAAYKITKMDKNTKYLQLIHRRREQSSDSHTISGWKPYGTPIVSLISCDDTITRGDIQVIVNRILSPFLLKGGNAQQAASAETNVVSNSINKDDTVSKATHVPTLPLLLVDDNNACIDLSMGEEKVVKLSPSSARVLVYIDWSQKLLEKYDTYPLETLPEVLKYGPVTKKARTEPLSLYTCLEAFLREEPLVPEDMWYCPKCKERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDFDLTNYIANKNNSRRQVYELYALTNHYGSMGSGHYTAHIKLLDENRWYNFDDSHISLISEDEVNTAAAYVLFYRRVKTDDDIVSNGA* 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3341 912 ProSiteProfiles DUSP domain profile. 14 143 IPR006615 GO:0004843
Mal3g3341 912 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 317 901 IPR028889 -
Mal3g3341 912 SUPERFAMILY DUSP-like 15 143 IPR035927 -
Mal3g3341 912 Pfam DUSP domain 37 143 IPR006615 GO:0004843
Mal3g3341 912 Gene3D - 157 244 - -
Mal3g3341 912 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 843 860 IPR018200 GO:0004843|GO:0006511
Mal3g3341 912 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 318 333 IPR018200 GO:0004843|GO:0006511
Mal3g3341 912 SMART dusp 33 146 IPR006615 GO:0004843
Mal3g3341 912 SUPERFAMILY Cysteine proteinases 315 901 IPR038765 -
Mal3g3341 912 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 12 911 - -
Mal3g3341 912 CDD Peptidase_C19R 746 899 - -
Mal3g3341 912 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 5 12 911 - -
Mal3g3341 912 Pfam Ubiquitin carboxyl-terminal hydrolase 317 898 IPR001394 GO:0004843|GO:0016579
Mal3g3341 912 Gene3D - 5 156 IPR035927 -
Mal3g3341 912 Gene3D Cysteine proteinases 720 908 - -
Mal3g3341 912 MobiDBLite consensus disorder prediction 267 297 - -
Mal3g3341 912 Gene3D Cysteine proteinases 308 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3341 Mal-Chr3 109785099 109796434 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3341 754 903 Miscellaneous Gene Families AT4G31670 34.641 2.38e-17 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3341 - - mtr:MTR_7g088760 1774.6