Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3274 ATGGCTTCCGATGCTGATATGGAGGACTATGGATTTGAGTACTCGGATGAGGAACAAGAGGAGCAGGATGTTGATATTGAGAATCAATATTACAATTCAAAAGGTTTGGTTGAAACTGATCCAGAAGGTGCACTTTCTGGTTTTGCCGAGGTAGTGCGCATGGAACAAGACAAGGCAGAATGGGGATTTAAAGCTCTGAAGCAAACTGTCAAGCTTTATTATAAACTTGGAAGGTATAAAGAGATGATGGAAGCCTACAGGGAGATGTTGACGTATATCAAATCAGCAGTGACCCGTAACTATAGTGAAAAATGCATAAACAGTATTATGGACTATGTCTCTGGTTCAGCTAGCCAGAATTTCGGTCTTCTGCAGGAATTCTACCAAACAACTCTGAGAGCCCTTGAAGAAGCAAAGAATGAGAGATTGTGGTTTAAGACAAATTTGAAGCTTTGTAAGATTTTCTTTGACATTGGGGAATATGGACGGATGAGTAAGATCCTTAAGGAGCTTCACAAATCTTGTCAAAGGGAGGATGGTACAGATGACCATAAGAAAGGAACTCAACTTTTGGAGGTTTATGCAATTGAAATTCAAATGTACACAGAGACCAAGAACAACAAAAAACTCAAGCAACTTTACCAGAAAGCACTTACTATTAAGTCAGCAATTCCCCATCCAAGGATAATGGGGATCATCCATGAATGTGGTGGGAAAATGCATATGGCAGAACGCCAGTGGGCCGAAGCAGCTACTGATTTCTTTGAAGCTTTCAAGAATTATGATGAAGCTGGGAACCAGAGGCGTATCCAATGCTTGAAGTACCTCGTTCTTGCCAACATGTTGATGGAGTCTGAAGTAAATCCATTTGATGGGCAGGAGGCTAAGCCATATAAGAATGACCCTGAAATTTTGGCAATGACAAATCTGATAGCAGCTTATCAACGAAATGAAATATTGGAATTTGAGAAAATCTTGAAGAGTAACAGAAGAACCATCATGGATGATCCATTTATCAGAAATTACATTGAGGATCTGCTAAAGAATATCAGAACACAGGTCTTGCTGAAACTCATCAAACCATATACAAGGATCAGGATCCCATTTATATCTAAGGAACTTAATGTACCTGAGCATGATGTTGAGCAGCTACTGGTGTCGCTTATTTTGGATAACAGAATTCAAGGACACATTGATCAAGTGAACCGGCTCTTGGAACGCTCTGATAGGTCTAAAGGAATGAAGAAGTATACGGCTGTGGATAAATGGAACACACAACTTAAATCTCTTTATCAAACTATCAACAACAGAGTTGGTTAA 1320 0.3962 MASDADMEDYGFEYSDEEQEEQDVDIENQYYNSKGLVETDPEGALSGFAEVVRMEQDKAEWGFKALKQTVKLYYKLGRYKEMMEAYREMLTYIKSAVTRNYSEKCINSIMDYVSGSASQNFGLLQEFYQTTLRALEEAKNERLWFKTNLKLCKIFFDIGEYGRMSKILKELHKSCQREDGTDDHKKGTQLLEVYAIEIQMYTETKNNKKLKQLYQKALTIKSAIPHPRIMGIIHECGGKMHMAERQWAEAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISKELNVPEHDVEQLLVSLILDNRIQGHIDQVNRLLERSDRSKGMKKYTAVDKWNTQLKSLYQTINNRVG* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3274 439 Pfam PCI domain 306 406 IPR000717 -
Mal3g3274 439 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 341 423 - -
Mal3g3274 439 SUPERFAMILY "Winged helix" DNA-binding domain 335 411 IPR036390 -
Mal3g3274 439 ProSiteProfiles PCI domain profile. 243 412 IPR000717 -
Mal3g3274 439 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 1 438 - -
Mal3g3274 439 PANTHER - 1 438 - -
Mal3g3274 439 Gene3D - 64 439 - -
Mal3g3274 439 MobiDBLite consensus disorder prediction 1 22 - -
Mal3g3274 439 SMART PINT_4 341 423 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3274 Mal-Chr3 108866801 108873450 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3274 K12176 - gmx:100788070 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3274 3 108866801 108873450 Mal3g3274 3 108866801 108873450 ECH