Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3267 ATGAGCGACGACATATTTGACGGACAGATATTAGCAGAGAAGTTGTTGAAACTCAATAATTCACAACAAAGCATTGAATCATTGTCCCGTTGGTGCATTCCTCACCAGAAGAGTGCAAAGGATATCGTTAAAATATGGGATAAATTGTTCAATGCATCCCAGAAAGAGCAGCGTGTCTCTTTTTTAAACCTGGCCAATGACATCTTGCAAAATAGTAGGCGGAAAGGTAGTGAGTTTGTCAATGAATTTTGGAAAGTTCTTCCAGCAGCTCTCAGGTGTGTTTATGAAAGCGGTGATGTACATGGAAGGAAATCAGTGAACAGACTTATTGACATATGGGAGGAGAGGAAGGTTTTTGGGTCGCGAAGTCAGGGTCTTAAGGATGAACTGATGAGTAAGAATCCCCTTCCATGCTCGGCAAACATTGGAAAAGGTTCAGATCCTATCAAGATAGTGAAGAGGGATGCCCACTCAGTGAGAATAAAACTGGCTGTTGGGTGTTTGCCAGAAAAAATACTGACAGCATTTCACTCTGTTCTTGATGAACATCTTAATGAGGAAGCTGCCTTGAATAAGTGTAACGCTGGTGTACACGATGTGGTTAAACTCTTGGAAGATGTTGAAAATACATTGGCTCAAGGGAACCAGCTGGGATCCACTTTGGTGAATAACTTGCAAGAGCGGGAAAAGGAGCTTAAGCAATATATGGAGCAACTCGAAAATGCTGAGGCTGCCAGGGCTTCTTTGCTTTCTCAGCTTAAAGATGCACTGCAGGAACAAGAATCAAAGCAAGAGCTTGTTCGCGCTCAGTTGCTAGTTGTACGAGGCCAGATTGAGAAAACAGCTGGTATCAGGAAGTGGATTAACCAAACAACAGAAGCCGCAGTTCAATTGAACAGCACCATTTCTCAGCCTACTTTTGCACAGTCTTCTATGCCATTTTCTCCTTTTCAAACTTCTGAAGAAGATAACAAGAAGGCAGCAGCAGCTGTTGCCGCTAAGCTCGCTGCCTCTTCATCGTCTGCTCAGATGCTTGCATCTGTTCTTTCTTCTCTAGTGGCGGAAGAAGCTGCCTCCAAGGGATTTACATTAGGATTACCTATTTTCAACCCAGAGAAAAGACCCAAAATTGAAAAATCGTCACCTGTTTCTGATGTTCATAGTTCTGATATGGCAAGTTCTTCCTTTTTCGCCACTTCACAACAGCCATCACTAACAAATCTGCAGCTTGCACCGTCAAACAACATGCAAATCACGTCTCAAGCCAATCAATTACAAGCTGCATTTGCTTCAGCACCCCTTCCCCCTCAGTATGTCCAATCAACTGGTTTCATGGATGGAGGAATACCTTATGGATACATATCAAATAACCTACCACCTCCACCTCCTTTTCCTCCACATGCTGCAACAGGGTTATCAATGCCTAGCACTCAACCAGCACAGCAGCAACAGCAGTCATCACCAGGAGGATTTTACAGGCCACCTGGCATTGGATTTTATGGGCAGTGA 1509 0.4374 MSDDIFDGQILAEKLLKLNNSQQSIESLSRWCIPHQKSAKDIVKIWDKLFNASQKEQRVSFLNLANDILQNSRRKGSEFVNEFWKVLPAALRCVYESGDVHGRKSVNRLIDIWEERKVFGSRSQGLKDELMSKNPLPCSANIGKGSDPIKIVKRDAHSVRIKLAVGCLPEKILTAFHSVLDEHLNEEAALNKCNAGVHDVVKLLEDVENTLAQGNQLGSTLVNNLQEREKELKQYMEQLENAEAARASLLSQLKDALQEQESKQELVRAQLLVVRGQIEKTAGIRKWINQTTEAAVQLNSTISQPTFAQSSMPFSPFQTSEEDNKKAAAAVAAKLAASSSSAQMLASVLSSLVAEEAASKGFTLGLPIFNPEKRPKIEKSSPVSDVHSSDMASSSFFATSQQPSLTNLQLAPSNNMQITSQANQLQAAFASAPLPPQYVQSTGFMDGGIPYGYISNNLPPPPPFPPHAATGLSMPSTQPAQQQQQSSPGGFYRPPGIGFYGQ* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3267 502 MobiDBLite consensus disorder prediction 471 490 - -
Mal3g3267 502 ProSiteProfiles CID domain profile. 3 135 IPR006569 -
Mal3g3267 502 Pfam CID domain 10 121 IPR006569 -
Mal3g3267 502 PANTHER RNA POLYMERASE II-BINDING DOMAIN PROTEIN 1 502 - -
Mal3g3267 502 CDD CID_RPRD_like 9 131 - -
Mal3g3267 502 SMART 558neu5 10 131 IPR006569 -
Mal3g3267 502 MobiDBLite consensus disorder prediction 456 502 - -
Mal3g3267 502 SUPERFAMILY ENTH/VHS domain 16 119 IPR008942 -
Mal3g3267 502 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 502 - -
Mal3g3267 502 Coils Coil 222 270 - -
Mal3g3267 502 Gene3D - 4 134 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3267 Mal-Chr3 108779088 108793091 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3267 K15559 - gmx:100814308 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3267 3 108779088 108793091 Mal3g3267 3 108779088 108793091 ECH