Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3261 ATGATCTCCATAGTTGAAGAAGTGAAAATGGGATCAGAAGAGTTAAAGAAGAACCTTTTGCAGCAACAAAACACTTCAGAGGAGGAGGAAGAGCCACTAAGGAAAAGGGTATGGGAAGAAAGCAAGAAATTGTGGATAGTAGCAGGCCCTGCCATATTCAATAGGTTTTCAACATTTGGTATCACAGTAGTTAGTCAATCCTTTATTGGTCATATTGGTTCAACCGAATTAGCTGCTTATGCCCTGGTTATGACTGTCCTAGTCCGGTTTGCTAATGGTATTCTGTTGGGTATGGCAAGTGCATTGGAAACACTATGTGGACAAGCATATGGAGCAAAACAATATGATATGCTAGGAGTGTATCTTCAAAGATCATGGATAGTTTTATTTTTAACCTCAATTCTTCTTCTTCCAATTTATATTTTTACCACACCAATTTTATTGGCACTTGGCCAAGATAAAGATATTGCTCAAGTTGCTGGAAGCATTTCAATATGGTCAATAGGTATCATATTTGCTTTCTCTGCCTCATTCACTTGTCAAATGTTCCTACAAGCACAAAGCAAGAACAAGATTATTGCTTACCTAGCAGCTGTTTCAATTTCAATTCATATTTTTTTGTCTTGGCTTTTAACTGTTAAGTTCAAGTTTGGGCTTAATGGTGCAATGACATCAATCATTTTGGCTTATTGGATACCAAATTTGGGACAGCTTGTTTATATCATGACACATTGTCCTGATACATGGAAGGGTTTCTCATTTTTGGCCTTCAAAGATCTTTGGCCTGTTATCAAGCTTTCTTTGTCTTCTGGAGCTATGTTATGTCTTGAAATATGGTACAACACAGTTTTGATTCTTCTAACAGGGAAAATGGAAAATGCTGAGATTGCAATTGATGCTCTGGCAATATGCCTCAACATCAATGGGTGGGAAATGATGATATCCCTTGGTTTCTTTGCTGGAGCTAGTGTTAGGGTGTCAAATGAACTAGGAAGAGGGAGTTCAAAGGCAGCAAAATTTTCCATTGTGATAACAGTGCTTACATCATTTTCCATTGGATTTGTGCTATTCTTGATCTTTCTATTTCTAAAGGGAAGACTTGCTTACATTTTCACCCCAGATCCAGATGTGGCTAATGCAGTTGGTGATCTCTCACCTTTGTTGTCAATCTCCATATTGTTGAACAGTGTCCAACCTGTGCTCTCAGGAGTTTCTGTTGGAGCTGGGTGGCAAAGCATTGTAGCATATGTAAACATAGGATGCTATTACCTAATTGGTATTCCTATTGGAGTTGTGCTTGGTAATCTTCTTCATTTGCAAGTTAAGGGTGTTTGGATTGGAATGTTGTTTGGAACTTTAGTACAAACCATAATGCTTATCACAATCACATTTAAAACTGACTGGGACAAGCAGGTTGAGATTGCTCGAAATCGAGTTAATAAATGGGCTGTAGTGGAGAATGATGATGAATCAAACAACACATCAAGGATATCTAGCTAA 1500 0.38 MISIVEEVKMGSEELKKNLLQQQNTSEEEEEPLRKRVWEESKKLWIVAGPAIFNRFSTFGITVVSQSFIGHIGSTELAAYALVMTVLVRFANGILLGMASALETLCGQAYGAKQYDMLGVYLQRSWIVLFLTSILLLPIYIFTTPILLALGQDKDIAQVAGSISIWSIGIIFAFSASFTCQMFLQAQSKNKIIAYLAAVSISIHIFLSWLLTVKFKFGLNGAMTSIILAYWIPNLGQLVYIMTHCPDTWKGFSFLAFKDLWPVIKLSLSSGAMLCLEIWYNTVLILLTGKMENAEIAIDALAICLNINGWEMMISLGFFAGASVRVSNELGRGSSKAAKFSIVITVLTSFSIGFVLFLIFLFLKGRLAYIFTPDPDVANAVGDLSPLLSISILLNSVQPVLSGVSVGAGWQSIVAYVNIGCYYLIGIPIGVVLGNLLHLQVKGVWIGMLFGTLVQTIMLITITFKTDWDKQVEIARNRVNKWAVVENDDESNNTSRISS* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3261 499 Pfam MatE 50 210 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mal3g3261 499 Pfam MatE 272 431 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mal3g3261 499 CDD MATE_eukaryotic 40 473 IPR045069 GO:0042910|GO:1990961
Mal3g3261 499 PANTHER PROTEIN DETOXIFICATION 22 484 - -
Mal3g3261 499 TIGRFAM matE: MATE efflux family protein 50 445 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mal3g3261 499 PANTHER MULTIDRUG RESISTANCE PROTEIN 22 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3261 Mal-Chr3 108696450 108700793 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3261 K03327 - gmx:100775619 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3261 3 108696450 108700793 Mal3g3261 3 108696450 108700793 ECH