Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3257 ATGGAATCAAGCGTTTTAGAAAGCATCGGCGTAGAGATAATCGGAGTAATGTCGCCGGTATCAATCTGCATGTTCCTCGTCGTCCTCCTCGTCTACACACTCTCCACCTCTTCCTCACCGGAAACCACCATCCGCACCGCCGCGAATCTCGTCTACGCCGAAAACCCCTCCGACACCACCGCACAAAAACTCGAAGGCGCACTTCTCAATGCCGTCGTCTTCGTCATCCTCATCGCCATCGTCACTTTCCTCCTCGTCCTCCTCTACTACTACAATTGCACCGCCTTCCTCCGTCACTACGTTCGCTTCTCCGCTTTCTTCGTCCTCGCTTCCATGGGCGGATCCATTTTCCTTTCGCTAATCCAACGCTTCTCAATTCCGTTAGATTCAATTACTTCGTTCATTCTTCTCTTCAATTTCACTATTGTTGGTGTGCTTTCAGTTTTCGCGGAAGCGATTCCGATTATTCTAAGGCAGTGTTATATGGTTTGTCTTGGGATTATCGTTGCTGCGTGGTTTACGAAGCTTCCGGAATGGACCACGTGGACGCTTCTTGTTGCTCTTGCTGTTTATGATCTTGTTGCTGTTTTAGCTCCTGGTGGTCCGTTGAAGCTTCTCGTTGAATTGGCTTCGAGCCGGAACGAGGAGCTTCCTGCTTTGATCTATGAAGCTCGCCCTACCGTTGCTCCTAACGGTAGGGCGGCTGCGTTAGGGTTATTTGTTGCCGGTGTTTCTGAAGCTCAATCGACTCAATCATCGTCGATTGAGCTTCAGGTGGTTAACAATGAGAATGAGGGTAATAGTAATACTCATGGTGGTGGTGGTGATTCTGTTGCTAGGGTTGAGGATTTTCGGAATGATGAAGGGGAGAGGTCACCATTGGTTGGTAATGCGAATCGCGAAGAAGAAAGGTCTCCACTTGTTGAGGTGATGGGGAATGAGAGAGAAATGGGAACAATGAGAAGAGAAGAAGAGGAAATTTCTGAGAGAGGGATTAAGCTTGGACTTGGTGATTTTGTGTTCTACAGTGTTCTTGTGGGAAGAGCTGCAATGTATGATCTTATGACTGTTTATGCTTGTTACCTTGCAATTATATCTGGACTTGGTTGCACTCTTATTTTGTTGTCGGTGTGTCGTCATGCTCTGCCGGCTCTTCCGATTTCGATTGCGTTGGGTGTGCTTTTCTATTTCTTGACTAGATTGTTGATGGAGCCTTTTATCGTTGGAACTGCCACAAATTTGATGATGTTTTGA 1254 0.4713 MESSVLESIGVEIIGVMSPVSICMFLVVLLVYTLSTSSSPETTIRTAANLVYAENPSDTTAQKLEGALLNAVVFVILIAIVTFLLVLLYYYNCTAFLRHYVRFSAFFVLASMGGSIFLSLIQRFSIPLDSITSFILLFNFTIVGVLSVFAEAIPIILRQCYMVCLGIIVAAWFTKLPEWTTWTLLVALAVYDLVAVLAPGGPLKLLVELASSRNEELPALIYEARPTVAPNGRAAALGLFVAGVSEAQSTQSSSIELQVVNNENEGNSNTHGGGGDSVARVEDFRNDEGERSPLVGNANREEERSPLVEVMGNEREMGTMRREEEEISERGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRHALPALPISIALGVLFYFLTRLLMEPFIVGTATNLMMF* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3257 417 Pfam Presenilin 10 407 IPR001108 GO:0004190|GO:0016021|GO:0016485
Mal3g3257 417 Gene3D Presenilin 309 408 IPR042524 -
Mal3g3257 417 PRINTS Presenilin family signature 192 209 IPR001108 GO:0004190|GO:0016021|GO:0016485
Mal3g3257 417 PRINTS Presenilin family signature 17 27 IPR001108 GO:0004190|GO:0016021|GO:0016485
Mal3g3257 417 PRINTS Presenilin family signature 175 182 IPR001108 GO:0004190|GO:0016021|GO:0016485
Mal3g3257 417 SMART psh_8 65 403 IPR006639 GO:0004190|GO:0016021
Mal3g3257 417 PANTHER PRESENILIN 1 417 IPR001108 GO:0004190|GO:0016021|GO:0016485
Mal3g3257 417 PANTHER PRESENILIN 1 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3257 Mal-Chr3 108575497 108576750 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3257 1 417 Miscellaneous Gene Families AT1G08700 65.789 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3257 K04505 - gmx:100819461 574.704