Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3251 ATGGCGCTATCATCATCTTCATCATCATGTTCATGTGTTTCGCCTTCCACAACAATTCTTCCTCCTTCGCGTCTTTTCACTACTCAATTCCGCCGTAACATCCGTTTCCGGCGAACAGTTTCCGCCACAGCCACTGTGTCCAGTCCATCATCCACTCCGTCACTCTTCTCTACCCCCAGAGAAGGACTTGACGCCGTTAACATTGCTGAAGATGTCACTCAGTTGATTGGAAATACACCGATGGTATATTTGAATAAAGTTACAGAAGGATGTGTTGCAAAAGTTGCTGCAAAACTCGAGTCCATGGAGCCATGCCGAAGTGTCAAGGACAGAATTGGCTATAGCATGCTATCTGAGGCTGAAGAGAGTGGAGCGATTTCTCCAGGGAAGACTGTTTTAGTTGAACCAACAACTGGAAATACGGGACTTGGCCTTGCTTTTGTTGCAGCAACTAAGGGGTATAAGCTGATAGTCACAATGCCTGCTTCTGTTAATATTGAGAGGAGAATCCTTTTACGCACATTTGGTGCAGAGGTTGTTTTGACAAATGCGGAGAAGGGGCTGAAAGGGGCTGTTGACAAAGCTGAAGAAATTGTATATGCCACACCCAATGCTTACATGTTTCGACAGTTTGATAATAGGAATAATACAAAGATCCACTTCGAAACTACGGGGCCAGAGATATGGGAGGATACCATGGGTAATGTTGATATATTGGTTGCTGCTATTGGAACTGGCGGCACTGTTACAGGCACTGGACAATATCTGAAAATGATGAACAAAAAAATAAAGGTGGTTGGGGTGGAACCTGCAGATAGAAGTATTATCTCAGGAGACAATCCAGGTTTCATACCAAGCATTTTGGATATCAAACTGCTTGATGAGGTCGTCAAGGTTACCAATGTTGAAGCTATTGAAATGGCAAGGAGATTAGCATTGGAAGAAGGATTACTGGTTGGGATTTCTTCAGGAGCTGCAGCAGCTGCTGCCATAACTTTAGCAAGACGGCCTGAAAATTCTGGAAAACTTATAGCGGTTATTTTTCCTAGTTTCGGTGAGAGATATATTACCACTACCCTCTTCAATTCTATCTATGAAGAGGTTCAGAGAATGTAA 1116 0.4346 MALSSSSSSCSCVSPSTTILPPSRLFTTQFRRNIRFRRTVSATATVSSPSSTPSLFSTPREGLDAVNIAEDVTQLIGNTPMVYLNKVTEGCVAKVAAKLESMEPCRSVKDRIGYSMLSEAEESGAISPGKTVLVEPTTGNTGLGLAFVAATKGYKLIVTMPASVNIERRILLRTFGAEVVLTNAEKGLKGAVDKAEEIVYATPNAYMFRQFDNRNNTKIHFETTGPEIWEDTMGNVDILVAAIGTGGTVTGTGQYLKMMNKKIKVVGVEPADRSIISGDNPGFIPSILDIKLLDEVVKVTNVEAIEMARRLALEEGLLVGISSGAAAAAAITLARRPENSGKLIAVIFPSFGERYITTTLFNSIYEEVQRM* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3251 371 PANTHER S-SULFO-L-CYSTEINE SYNTHASE (O-ACETYL-L-SERINE-DEPENDENT), CHLOROPLASTIC 42 371 - -
Mal3g3251 371 Pfam Pyridoxal-phosphate dependent enzyme 72 348 IPR001926 -
Mal3g3251 371 TIGRFAM cysKM: cysteine synthase 73 361 IPR005856 GO:0004124|GO:0006535
Mal3g3251 371 Gene3D - 74 356 IPR036052 -
Mal3g3251 371 TIGRFAM cysK: cysteine synthase A 73 361 IPR005859 GO:0004124|GO:0006535
Mal3g3251 371 Gene3D - 110 212 IPR036052 -
Mal3g3251 371 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 68 364 IPR036052 -
Mal3g3251 371 CDD CBS_like 77 357 - -
Mal3g3251 371 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 98 116 IPR001216 GO:0006535
Mal3g3251 371 PANTHER CYSTATHIONINE BETA-SYNTHASE 42 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3251 Mal-Chr3 108519734 108524348 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3251 64 371 Miscellaneous Gene Families AT3G03630 81.169 6.13e-173 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3251 K22846 - gmx:100819100 550.051