Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3247 ATGGGTGGCGCCGCCCCAAGGTTCATCTTCATCCTCCGTCACAACCTCCGTCTCCTTCCTCCTTCTTTCTCCTCTCACTTCCACCACCACCACCGCACTCTCTTTTCCTCATTCACTCGTTCTCCTTCTCTCACACCAAAACTCAAACTCAAAGCCTCACAAAACCAACAACAACAACACATTCACACACAACCTTCATCATCTCCCCTCACTGGGACCCACCATCCATGGCCCGAATTTTCCAGATTTCTCTCCCACATCTCCTCCGCCGGCTACACGTCCCCTGCCGATGGTTTTCCTTCCACCGGAGAATTATCGCCGGCAGAGGTCAGTGCTTGCTTGACTTTCGCTCGAGATAGACCTAACCTTCTCAGATTGCTTTCGATGAGAGACGTTGCGGTTGTGGTTGAACATGGTACTCCGTTTATGTTCTCCGACTCGCAGGATTCTGTTTGGAAGATGAAGTCTTTTCTATCCAACGGTGACTCCACTGCCTTGGACTCTGATAAAGCAAATATGGTTGATCTGATGAAATTTATGCTGAGTTATGCAAGTAGCTGCTTGGTCTCTTCAGAAAGGAACAATATCTATAACAGAAATCTTGTTGAATCATCAGTCAGAAATCTATTCAGTGAACTTTTCAAGCTGAGTTATAGTGCACCTGGACCCAACTCTTTTGATTCGGTGCAAAATCAAATGCCTGGTGGTAGATTTGGGAGTACAATGCCTCCAGGACAAAACATTGAAATGAAAAGGGGTGATTGGATTTGCCCAAGGTGTAATTTCATGAATTTTGCAAGAAATATTAAATGTCTTGAATGCGAAGAAGCAAGGCCAAAAAGACAGCTGACTGGAGGAGAATGGGAATGTCCTCAGTGTGATTTTCATAATTATGGGAGGAATGTAGCTTGCTTACGGTGTGATTGCAAGCGGCCTGGACAAATATCTCTGGGTTCCACTAATACCAAATCACATCCAGGGTATGGAAATGTAAACAATTCTAATGCTTCAGATATTGATGCTCGGTTGGTGGCTAATGAAGAAAAGGCACAACGTTGGTTTAACAAGGTCTCTCAACTTGACAACAATTCTGATATTAACAGTGTGGTAGACGATGAAGATTTTCCGGAAATAATGCCGTTAAGGAAAGGAGTTAATAGATTTGCTGTAAGCACAAGGAAAACTCCATTGGAGAGGAGGTTGACCAATGCTCAATACAAGAGAAACTTGGGAAATAACGACGCTCCCGAAGTTGAGGACTTTAAAACTGGGGAGTCAGCCAAGTCCCATGATACTCTGGATGACATTCTAGGTCGTTCAACCAGCCTTCCTCGATCTGACTACAAAAACATGGGTGCTGAACAAAGTTTCAGTGGAGAAAGGCAACCATCAACTGCTAGCAATACATCGCATTTCCAAGATGTGACAAGGAACAACACTAATACTCTTCCCCCTTTTCCATCATATGCCAGTTCTGGTGATACTGACAATACACAACTTTCTAATAACTCTACAAGTGAAAATGTCATCAAGGATAAGGAGAAAGAGCAAGCTGAAAAATCCGAAGGATGGTTTAGAAAGATTGCGGAGCTGAATGATGTTCCAGATATAACAAGTGCAATATCCGATGATGATTTCCCTGAAATAATGCCGATGCGTAAAGGAGAAAATCGATTTGTTGTTAGCAAGAAAAAGGATCGGTCCTTGACAACACCAGCATATAAGAGACGTTTGGCCATGGACCAATCTGGCAATAACAACTTTGTCCCCTTTGTACCCTTCCCCCCAGATTACTTTGCCAAAAAGGATAAGCCACAGGCAGATGTAACAGATTCAACAGACACGTCCAATGTTAAATCATCCTCAATATCTGAAGCGGCTGACATGTCAGGTCATGCTAGATTTAGAGCTGAACATAGTCCAGAATCTTCTTCTGGTCAGAGCTCAAGTAACAGCAATCATGTTGTTTCTACTTATGGCGCTACAAGCAGTGGTAATTCAAGCCAGGGTTTCAATCAAGATCATGTGCTAAATTTGATAGAGAATTCGTCCTCAGGTTCAGCGTCTGAGAACCAGAGTGTTGGAACAGAATGGACAGGAAAGAGTTTAGAGGGATCAGCGGTCAGGGAACCGGATCCTTTGGACATGTCAGAGGAGGCAAAGGCAGAGAGGTGGTTCCGTCGCGTTGCGCAGATTAAGGACATCTCTGAGCTCAGTAATATTCCAGACGAAGATTTTCCTTCAATAATGCCTATGCGTAAAGGGTTGAACAGATTCGTTGTGAGCAAGAGGAAAACGCCACTGGAGAGGAGATTGACATCTCAGCAGTACCGAAGAAATCTTCCGGTTGTGAGCTCAGATCCTATTAAGAGAGAAAATGAAGGTAGCTGA 2391 0.4391 MGGAAPRFIFILRHNLRLLPPSFSSHFHHHHRTLFSSFTRSPSLTPKLKLKASQNQQQQHIHTQPSSSPLTGTHHPWPEFSRFLSHISSAGYTSPADGFPSTGELSPAEVSACLTFARDRPNLLRLLSMRDVAVVVEHGTPFMFSDSQDSVWKMKSFLSNGDSTALDSDKANMVDLMKFMLSYASSCLVSSERNNIYNRNLVESSVRNLFSELFKLSYSAPGPNSFDSVQNQMPGGRFGSTMPPGQNIEMKRGDWICPRCNFMNFARNIKCLECEEARPKRQLTGGEWECPQCDFHNYGRNVACLRCDCKRPGQISLGSTNTKSHPGYGNVNNSNASDIDARLVANEEKAQRWFNKVSQLDNNSDINSVVDDEDFPEIMPLRKGVNRFAVSTRKTPLERRLTNAQYKRNLGNNDAPEVEDFKTGESAKSHDTLDDILGRSTSLPRSDYKNMGAEQSFSGERQPSTASNTSHFQDVTRNNTNTLPPFPSYASSGDTDNTQLSNNSTSENVIKDKEKEQAEKSEGWFRKIAELNDVPDITSAISDDDFPEIMPMRKGENRFVVSKKKDRSLTTPAYKRRLAMDQSGNNNFVPFVPFPPDYFAKKDKPQADVTDSTDTSNVKSSSISEAADMSGHARFRAEHSPESSSGQSSSNSNHVVSTYGATSSGNSSQGFNQDHVLNLIENSSSGSASENQSVGTEWTGKSLEGSAVREPDPLDMSEEAKAERWFRRVAQIKDISELSNIPDEDFPSIMPMRKGLNRFVVSKRKTPLERRLTSQQYRRNLPVVSSDPIKRENEGS* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3247 796 SMART zf_4 253 277 IPR001876 -
Mal3g3247 796 SMART zf_4 286 310 IPR001876 -
Mal3g3247 796 Pfam Zn-finger in Ran binding protein and others 252 279 IPR001876 -
Mal3g3247 796 Pfam Zn-finger in Ran binding protein and others 286 312 IPR001876 -
Mal3g3247 796 MobiDBLite consensus disorder prediction 407 517 - -
Mal3g3247 796 ProSitePatterns Zinc finger RanBP2-type signature. 255 274 IPR001876 -
Mal3g3247 796 MobiDBLite consensus disorder prediction 771 796 - -
Mal3g3247 796 MobiDBLite consensus disorder prediction 443 507 - -
Mal3g3247 796 MobiDBLite consensus disorder prediction 48 72 - -
Mal3g3247 796 MobiDBLite consensus disorder prediction 684 717 - -
Mal3g3247 796 MobiDBLite consensus disorder prediction 610 627 - -
Mal3g3247 796 MobiDBLite consensus disorder prediction 684 700 - -
Mal3g3247 796 ProSiteProfiles Zinc finger RanBP2 type profile. 284 313 IPR001876 -
Mal3g3247 796 PANTHER ZINC FINGER PROTEIN 3 795 - -
Mal3g3247 796 PANTHER ZINC FINGER PROTEIN VAR3, CHLOROPLASTIC 3 795 - -
Mal3g3247 796 ProSitePatterns Zinc finger RanBP2-type signature. 288 307 IPR001876 -
Mal3g3247 796 SUPERFAMILY Ran binding protein zinc finger-like 245 280 IPR036443 -
Mal3g3247 796 Gene3D - 282 314 - -
Mal3g3247 796 Gene3D - 244 281 - -
Mal3g3247 796 ProSiteProfiles Zinc finger RanBP2 type profile. 251 280 IPR001876 -
Mal3g3247 796 MobiDBLite consensus disorder prediction 413 435 - -
Mal3g3247 796 MobiDBLite consensus disorder prediction 640 672 - -
Mal3g3247 796 MobiDBLite consensus disorder prediction 602 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3247 Mal-Chr3 108491706 108497331 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3247 112 317 EF-hand Containing Proteins AT1G55040 37.021 4.72e-38 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3247 - - cam:101505193 1275.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3247 3 108491706 108497331 Mal3g3247 3 108491706 108497331 ECH