Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3228 ATGGCCACCTTGAATAATCACCATAACAGAAGCACACAACCACAAGTTCAACAACAAACTCTTCACATTGAGGCACAAGATTCAAGCTTTGTAAACACACCAACAGTGGCAGGACAAACAGTGAGAAAGATATTTCAGATTCTTTACTACTTGTATCTGATTCTGATTTCAATCTTGGTGATTTTCATCACCATCTATGGTCTTACCTTAGACTCTTCCACCCACCATTTCCACCCTGAGAAATGGTACCCTCCACTTCTAGCATCAACAGTATGTGCAGGAGTTCTTGGTTTCACATGGCAACGGATCATTGCACGTCACCCGGAAAAGGCACTAAAGGCAGCATTTTGGTTGAGTCCATTGTTAACATGTGCAATGGGAATTCTGTTTGTGTTAATTGGTTCTGCATTGAGTTTGATAGCTGGTATAGTTTCTTTGATTTCTGCAGTGATTCAATCCCTCTATGGTTGTTGGGTCAGTAAGAGGTTCGTATATGCCGCCGAAATCTTTTTGGTTTCATTAGCTTCTCCTCCTGCTAAAACCAAGGGCTTAGCATGTTCTTTAACCGTCATCGGTGTCGTTTACTGCTGTTTTCTTGTGTCTGGAATTGGAGGCGCAAGAGCTATCGAAAACAGAACCAAACTAGCAGACATTTGCATCTTAGTGATCATACTGAGCCTTGGATGGACTATGCAGGTTCTGAAGAATGCAATGCAAGTCACAATTTCAAGGGTCAAGTATATGCATTTTGCTGGAGGAAGTGACATAGACACCAGAGTTGCATTTTGTGACACAATCAAGCACTTAATTGGAAGTGTGTGCATAGGCTCCATCCTTGTCCCTACCATAGGTCTGTTCCGAGGCTTTGCACGATCAACGAGTCTGATTGGAGGAGAAACAAATGAGTGCATGTTTTCTTGTGTTAGTTGTTCGATGGGAATTGCGTCGCTTCTTGTGACAAAGGGGAACAGATGGGGTTTTGTGCATGTTGGAGTTTATAACAAAGGGTTTGTGCAAGCATCTTCTGATACTTGGGACATGTTCATTAGAGTTGGATTAGAGGAATTGATAGACTTAGATCTCACTGGTGCATTCTGTTTTCTTAGTGGTGTTTCAGTAGGTGCAATTTGTAGCCTTGTGAGTGGAATCTGGAGTCTTGCAGTGTACAAGAACTATGCCATGGAATTATCCATTTATGCTTTCCTCATTGGCTATTTCATGTGTAGGTTGGCTATTGCATGGCCACAAGCATGTGTTTCAGCTTACTATGTGGCCTACGCAGAGAACCCACAGAGCACTCAATTTGACTCAACTATTCCAGTACGCTTGGAGCAGCTTCACAGATCTCAAGCTTTGCAAAGATCCAGCTAA 1371 0.4252 MATLNNHHNRSTQPQVQQQTLHIEAQDSSFVNTPTVAGQTVRKIFQILYYLYLILISILVIFITIYGLTLDSSTHHFHPEKWYPPLLASTVCAGVLGFTWQRIIARHPEKALKAAFWLSPLLTCAMGILFVLIGSALSLIAGIVSLISAVIQSLYGCWVSKRFVYAAEIFLVSLASPPAKTKGLACSLTVIGVVYCCFLVSGIGGARAIENRTKLADICILVIILSLGWTMQVLKNAMQVTISRVKYMHFAGGSDIDTRVAFCDTIKHLIGSVCIGSILVPTIGLFRGFARSTSLIGGETNECMFSCVSCSMGIASLLVTKGNRWGFVHVGVYNKGFVQASSDTWDMFIRVGLEELIDLDLTGAFCFLSGVSVGAICSLVSGIWSLAVYKNYAMELSIYAFLIGYFMCRLAIAWPQACVSAYYVAYAENPQSTQFDSTIPVRLEQLHRSQALQRSS* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3228 456 Pfam Plasma-membrane choline transporter 144 430 IPR007603 GO:0022857|GO:0055085
Mal3g3228 456 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 15 450 IPR007603 GO:0022857|GO:0055085
Mal3g3228 456 PANTHER F20H23.27 PROTEIN-RELATED 15 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3228 Mal-Chr3 108185047 108187656 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3228 - - lja:Lj1g3v3981460.1 685.256