Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3220 ATGAACATTCTCTCATCACGAACAAGCTCCCGTTCCGTTACAGAAACCGTTAACGGTTCACACAAGTTCGTAATCAAAGGCTACTCACTTGCAAAAGGAATGGGAGTTGGAAAACACATAGCCAGCGAAACTTTCACCGTCGGTGGTTACCAATGGGCTATTTACTTTTACCCCGACGGTAAAAATCCTGAGGATAATTCTGCTTATGTTTCTGTTTTCATTGCTCTTGCTTCTGAAGGTACCGATGTAAGAGCGCTTTTTGAACTCACTTTGCTTGATCAGAGTCCTAATGGGAAACATAAGGTTCATAGTCATTTTGATCGCTCTCTTGAGAGTGGTCCTTATACTCTTAAGTATCGCGGCAGCATGTGGGGGTACAAGCGGTTTTTCAAACGTGCTCAACTTGAGGCATCATCCTTCCTTAAGGATGACTGCTTGAAGATAAACTGCACTGTTGGCGTTGTTGTGTCGTCCATAGATTGCTCTAAATTGACCACCATACATGTTCCTGAATCTGATATTGGATCGCATTTTGGCATGCTGTTAGAGAATGAGGAAGGATCTGATGTTACTTTCTCTGTTGGTGGAGAAAGGTTTCATGCACACAAGCTTGTTATGGCAGCTCGGTCAACTGCATTTGAAACTGAGTTTTTCAATAGTATGGAGGAAGATGACCGTGATGTAGTTGTTACGGACATGGAACCTAAAGTTTTCAAGGCTTTGCTTCATTTTATTTATAGAGACACTCTTATAGAAGATGAAGAGTTCTTCATGTCACGTTCATCGTTCCTGCCTTCAATATCTGAAACATTTGCAGCAAAATTATTAGCTGCTGCAGAAAAGTATGATTTGCCTAGACTTAAGCTGATGTGTGAGTCTGTACTTTGCAAAGATATATCTATAGATTCTGTTGCCTATATTCTGGCTCTTGCCGATCGCTATCATGCTACGGAGTTAAAGTCCATCTGTCTACAATTTTCTGCTGAAAACCTTGTTGCTGTGATGCAGTCTGATGGTTTTGAGTATCTAAAGGAAAACTGTCCGTTGCTGCAATCAGAACTGCTTAAGACAGTTGCAGGAGGCGAAGAGGAATTTAGTGGTGAAGGAAAATGCCGAAGTGTGTGGGCCCAAGTTTCTGATGGCGGTGAGACTAATGATAGGAGCGTAAGACAACAAACCTGGGAAAACGGAGTTGAAAGAGGTCAGAACTTATGGGTTAACCTTTCTGACGGTGTTAACAATGATAGGAGTCCAGGGCAAGAAGCTTGA 1269 0.4216 MNILSSRTSSRSVTETVNGSHKFVIKGYSLAKGMGVGKHIASETFTVGGYQWAIYFYPDGKNPEDNSAYVSVFIALASEGTDVRALFELTLLDQSPNGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFKRAQLEASSFLKDDCLKINCTVGVVVSSIDCSKLTTIHVPESDIGSHFGMLLENEEGSDVTFSVGGERFHAHKLVMAARSTAFETEFFNSMEEDDRDVVVTDMEPKVFKALLHFIYRDTLIEDEEFFMSRSSFLPSISETFAAKLLAAAEKYDLPRLKLMCESVLCKDISIDSVAYILALADRYHATELKSICLQFSAENLVAVMQSDGFEYLKENCPLLQSELLKTVAGGEEEFSGEGKCRSVWAQVSDGGETNDRSVRQQTWENGVERGQNLWVNLSDGVNNDRSPGQEA* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3220 422 ProSiteProfiles BTB domain profile. 188 254 IPR000210 GO:0005515
Mal3g3220 422 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 6 372 IPR045005 GO:0016567
Mal3g3220 422 Gene3D Potassium Channel Kv1.1; Chain A 164 293 IPR011333 -
Mal3g3220 422 SMART BTB_4 188 299 IPR000210 GO:0005515
Mal3g3220 422 CDD MATH 19 152 IPR002083 GO:0005515
Mal3g3220 422 CDD BACK_AtBPM-like 296 357 IPR034090 -
Mal3g3220 422 SMART math_3 23 135 IPR002083 GO:0005515
Mal3g3220 422 SUPERFAMILY TRAF domain-like 15 154 - -
Mal3g3220 422 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 4-LIKE 6 372 - -
Mal3g3220 422 CDD BTB_POZ_BPM_plant 174 296 - -
Mal3g3220 422 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 17 156 IPR008974 GO:0005515
Mal3g3220 422 SUPERFAMILY POZ domain 165 299 IPR011333 -
Mal3g3220 422 Gene3D - 298 372 - -
Mal3g3220 422 Pfam BTB/POZ domain 180 297 IPR000210 GO:0005515
Mal3g3220 422 ProSiteProfiles MATH/TRAF domain profile. 18 152 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3220 Mal-Chr3 108037692 108045848 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3220 K10523 - gmx:100809683 793.112