Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3219 ATGCATCTCCCACGCACACTCCTACGCCCCTTCCTCCACCGCCGCCACTTCTCCGCCACAGCCACCGCCACCGCCACCCCCATCCTCCACCCTCCAGAGCCAGACCTACTACAACCCCTAACCTACCTCGACGGCTTTCCAAAACCTAACCCGAAGTACAACGAAACCATCCTCGCCATTCCCCGCAAAGATTCCGGCAGAAACATCTCCGCCAAGGAGCGTAAAGTCGGCCGCGTTCCGAGCATCGTCTTCGAGCAGGAAGACGGTCAGCACGGTGGCAACAAACGCCTCATTTCCGTTCGTTCCGATCAGATCAGGAAACTTGTCAACCACCTTGGTCGCTCGTTCTTTCTCTCTCGTCTCTTTCACCTTCAAGTTCTTCACCAATTTGACCCTGATTCAAACCCTAGTGATGAAGATATCATCGAAAACGTTCGCGTTTTGCCTCGCAGTATTCATTTGAAAGCTGGAACAGATGCACCTTTGAATGTGACATTTATAAGGGCCCCATCAGATGCTTGGTTGAAAGTTGATGTTCCTATTGTATTCAGAGGAGATGATATATCTCCTGGACTCAAGAAAGGTGCTTCTTTGAATACCATCAAAAGGACTGTTAAGTACCTATGCCCTGCCGACATTATTCCTCCATATATTGACGTGGATTTAAGTGAGTTGGATGTGGGGCAGAAGGTGCTCATGGGTGATCTCAATGTTCATCCTGCATTAAAACTTCTTCACTCAAAAGATGAAGCTGTTTGTAAAATTATGGGCCAAAGGGTTTCTGAAACACAACCAAAGAAAACGAAGTAA 810 0.4827 MHLPRTLLRPFLHRRHFSATATATATPILHPPEPDLLQPLTYLDGFPKPNPKYNETILAIPRKDSGRNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRSDQIRKLVNHLGRSFFLSRLFHLQVLHQFDPDSNPSDEDIIENVRVLPRSIHLKAGTDAPLNVTFIRAPSDAWLKVDVPIVFRGDDISPGLKKGASLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKVLMGDLNVHPALKLLHSKDEAVCKIMGQRVSETQPKKTK* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3219 269 CDD Ribosomal_L25_TL5_CTC 56 168 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Mal3g3219 269 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 38 268 - -
Mal3g3219 269 Pfam Ribosomal L25p family 59 166 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Mal3g3219 269 SUPERFAMILY Ribosomal protein L25-like 61 257 IPR011035 GO:0006412
Mal3g3219 269 Gene3D Ribosomal protein L25, beta domain 171 264 IPR037121 -
Mal3g3219 269 PANTHER BNAA01G13300D PROTEIN 38 268 - -
Mal3g3219 269 Pfam Ribosomal protein TL5, C-terminal domain 176 257 IPR020057 -
Mal3g3219 269 Gene3D Ribosomal Protein L25; Chain P 56 169 IPR020056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3219 Mal-Chr3 108018666 108022629 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3219 K02897 - gmx:100809143 402.905