Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3195 ATGCAGACAAGGACGGTTCAAGTGAAGCAACTTTCAGATCTAGCTACTGAGAGAGAGATTCATGAATTCTTCTCTTTTTCTGGTGAAATTGAACACATTCAGATCGTTAGAGAATATGGGAAACCAAAGACTGCATTTGTGACATTTAAAGATCCCAGAGCGCTTGAAATTGCGTTATTGTTATCGGGAGCAACCATAGTAGATCAGATTGTGATTATAAGTCCAGCCGAAAACTATGTTGCAAATCGTGAGATGCAGGAAGTAGGGGTGGTGGAATATGCTATAAATGTTGCTCCTGAAGATACAGCTTCGAATACTGAGGAGGAGAAACCTGGTGGAAGAATATATCTTAGTAAAGCACAAGATGTGGTTACAACTATGCTGGCAAAAGGATCAGCGATAAGACAAGACGCTGTGAACAAAGCTAAAGCATTTGATGAGAAGCATCAGTTGAGTGCCAATGCATCTGCAAAGGTCAGTTCTTTTGACAAGAGAGTTGGACTGACAGAGAAATTCACAGTTGGACTCTCTGTAGTGAATGAGAAAGTGAAGTCTGTGGATCAGAGGCTACATGTTTCAGATAAAACAATGGCAGCAATATTTGCAGCCGAGAGGAAGTTGAATGATACTGGATCAGCTGTCAAAACAAGCAGATATGTGACTGCTGGAACATCATGGTTAACTGGTGCTTTTAGCAAGGTGGCGAAGGCCGGAAACGTTGCTGGAACTAAAACTAGAGAAAAGTTTAATATGGCTGTTTCAAACTTGACATCAAAGGAAACCTCATTAGTTGTATAG 798 0.4085 MQTRTVQVKQLSDLATEREIHEFFSFSGEIEHIQIVREYGKPKTAFVTFKDPRALEIALLLSGATIVDQIVIISPAENYVANREMQEVGVVEYAINVAPEDTASNTEEEKPGGRIYLSKAQDVVTTMLAKGSAIRQDAVNKAKAFDEKHQLSANASAKVSSFDKRVGLTEKFTVGLSVVNEKVKSVDQRLHVSDKTMAAIFAAERKLNDTGSAVKTSRYVTAGTSWLTGAFSKVAKAGNVAGTKTREKFNMAVSNLTSKETSLVV* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3195 265 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 78 IPR000504 GO:0003723
Mal3g3195 265 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 66 IPR000504 GO:0003723
Mal3g3195 265 SMART rrm1_1 5 74 IPR000504 GO:0003723
Mal3g3195 265 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 1 264 - -
Mal3g3195 265 Gene3D - 1 87 IPR012677 -
Mal3g3195 265 SUPERFAMILY RNA-binding domain, RBD 2 81 IPR035979 GO:0003676
Mal3g3195 265 PANTHER RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN-RELATED 1 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3195 Mal-Chr3 107778481 107781743 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3195 - - mnt:21397849 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3195 3 107778481 107781743 Mal3g3195 3 107778481 107781743 ECH