Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3194 ATGGAAGTAGCTAGTTGTCCACATGCACAGAAGCAGAATTTGCATACAACAGGTCGCAAAGTTTATTCTGGATCCCAAAAAGATTTGTGGCTTGTTGTCCGAGTAGGATCTCTTAGTGATGTAGAGTCGGCGTTGTCATCACTAAAAAAGAGTGGTGGCAATATCAATGTGAGGAACACCTTCGGGTTGACTCCTCTTCATGTTGCAGCTTGGAGAAACCACATTCCCATTGTAAGGAGGCTTCTTGAGGCTGGTGCAGATCCTGATGCCCGAGATGGAGAATCAGGATGGAGTAGCCTTCACAGGGCTCTGCATTTTGGTCATCTTGCTGTTGCAAGCATCCTTCTTCAGCATGGTGCCTCAATTACATTGGAGGATTCTAAATCTCGAATACCTGTAGATCTGATATCTGGCAATGTGTTTCAGGTTTTTGGAAATGAACACAGTTCAGTTGCTACTGAGCTATTTAGCTGGGGCAGTGGTGCAAATTATCAGCTTGGTACTGGAAATGCACATATCCAGAAGCTGCCATGCAAAGTTGATTCACTTAATGGTTCAATCATTAAGCTGATTTCTGCGTCGAAGTTCCATAGTGTGGCCCTTACTGATCGTGGAGAAGTGTATACTTGGGGATTCGGAAGGGGGGGCCGTCTAGGGCATCCTGATTTTGACATACACAGTGGTCAAGCTGCCGTCATCACTCCCCGCCAGGTGACTTCTGGTCTAGGTTCTCGCAGAGTGATGGCAATTGCTGCAGCTAAGCATCATACCGTTGTTGCTACTCAGGGCGGGGAAGTGTTCACTTGGGGATCCAATAGAGAGGGACAGCTTGGGTACACTTCTGTGGATACACAACCTACACCTCGTAGAGTATCTTCTTTGAGGTCAAGAATTGTTGCCGTTGCTGCAGCAAACAAGCACACAGCTGTAGTTTCTGATTTAGGTGAAGTTTTTACTTGGGGGTGCAATAGAGAGGGTCAGCTTGGTTATGGCACCTCAAACTCGGCATCTAACTACACCCCACATGTGGTTGAATCCTTGAAGGGAAAGATTTTAACTAGAGTCTCTGCAGCAAAATATCACACAATTGTATTAGGATCTGACGGAGAGGTATTTACCTGGGGTCATCGACTTGTTACTCCAAAACGTGTAGTGATTACTAGGAACTTAAAGAAAAGTGGAAGCATTCCTTTAAAGTTTCATCGCAAGGAACGACTTCACGTAGTTTCTATAGCTGCTGGAATGGCACACAGCACGGCTCTTACAGAAGATGGTGCACTATTTTATTGGATCTCCTCTGATCCTGATCTTAGATGCCAACAGTTATATGCTATGTGTGGAAGAAATATGGTGAGCATATCTGCTGGAAAGTACTGGACTGCTGCAGTTACAGCTACAGGTGATGTTTACATGTGGGACGGGAAGAAAGGTAAGGATAAGCCGCTAGTTGCAACTCGGATGCATGGTATAAAGAAAGCTACTTCAGTTTCAGTTGGTGAAACACATTTGTTAATTGTGGCTGCTCTATATCATCCTGTATACCCTATCAACACTATTGATAATTCTCAGAAGCTCAAGTCGATTAATGGAAGTAGTATGGAAGAGTTAAATGAAGACATTTTATTTGAGGATATTGATTCCCATAATTCCTTTCAAGATGATAATATTAGACAAAGATCTACACCCAGCTTAAAAAGTCTCTGTGAAAAAGTAGCAGCAGAGTCTCTACTGGAGCCACGGAATGCCATACAATTGCTTGAGATTGCTGATTCTCTTGGAGCAGATGATTTGAAGAAATATTGCGAGGACATTGTCATGCGAAACCTTGATTTTATATTATCAGTTTCAACACATGCTGTATCAAGTGCTTCATTAGATATTTTGGCGAACCTCGAGAGGTTGTTAGACCAGAGATCATCCGAGCCGTGGAGTTACCGTCGGCTCCCAACTCCAACTGCTACACTCCCTGTCATCATTGACAGCGAAGAGGATGATTACGAGATAGAGTGTCAAAGGACTTGTGACAAACCAATGAAAATGTCTTCACTGAAATTGGAGAAAGTTCAAAGGTCAGATTCCTTTCTACAGCCCAAGGATGACCCTGATAGTGAAATCTTGAAAGTAGTTCGAGCTATAAGGAAGAAGTTGCAGCAGATTGAGATGCTTGAAACTAAGCAGTCTAAAGGACATCTTCTCGATGACCAGCAGATTGCGAAACTTAAATCTAAGTCAGCACTTGAGAGCTCACTTGCTGAGCTAGGTGTTCCTGTAGAGACCTCACAGAATAAAGAGTCATCTTCTATTTTAGTAGAAGGGAAAGGTAGTAAGAAAGGTAAATCATCGAAAAAACAAAGGAGAAAGAGCAGCAGCAAATCAAACACAGAGCAGACAGAAAGAGAATCTGTTTATTCTAAAAGTGAAGAGATCCCCGAATCTGAAGACCTGTTGGACATTGACATCATGACTACTCCTAATTCAAAGGTGGAAGAGGATATCTGCAAACATTCCACGGCAGACCAGGGTGAAAAAGATTTAGGTTTTGTTGTACAGAAGAAAGATACTTCAGAGTTGCTGAAGGGTAAGGGTCAGTCACCAAAAGTTTCCAAGAAGAAGAACAAGAAGGGTGGGCTTTCTATGTTTCTGAGTGGTGCTCTTGATGAAGTCCCAAAAGAGGTGGCTCCCCCTCCACCGACACCAAAAAATGATGGTCCTGCATGGGGCGGGGCCAAGTTTTTGAAGGGTTCTTCTTCTCTTCGCGAAATCCAGGATCAGCAGAGCAAAATAGTAAAAGGTAACAAGCCAGCTGAGGCTAAAGACAAGGTGGAAGATCTTTCTGACTTTGGCAGTGGTGGGAAAATAAAGTTGAGTTCATTTCTTCATTCTAGCCCAATACCTGTTGCGTCAACTAGAAGTCCTCAGGCATCTGATGGTGATAAAAATACCCCTCCTTGGGCTGCTTCAGTAACCCCTCCTCAACCCTCTCGGCTGTCTTTAAGGGACATCCAAATGCAACAGGTAAAGAAACAACAAGGCCTTTCCAGTAGTCCAAAGACTAAAACTTCTGGATTCACTATAGCTACTGGTCAAGGCTCGCCATCTGAAGCAACCGGGATGAACCGTTGGTTCAAACCCGAAGTGGAAACACCATCCTCCCTTCGTTCGATTCAAATCGAGGAAAAAGCTATGAAAGATCTCAAACGCTTCTATAGCAGTGTCAAGATTGTCAAAAAGCAATGTTAA 3240 0.4355 MEVASCPHAQKQNLHTTGRKVYSGSQKDLWLVVRVGSLSDVESALSSLKKSGGNINVRNTFGLTPLHVAAWRNHIPIVRRLLEAGADPDARDGESGWSSLHRALHFGHLAVASILLQHGASITLEDSKSRIPVDLISGNVFQVFGNEHSSVATELFSWGSGANYQLGTGNAHIQKLPCKVDSLNGSIIKLISASKFHSVALTDRGEVYTWGFGRGGRLGHPDFDIHSGQAAVITPRQVTSGLGSRRVMAIAAAKHHTVVATQGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLRSRIVAVAAANKHTAVVSDLGEVFTWGCNREGQLGYGTSNSASNYTPHVVESLKGKILTRVSAAKYHTIVLGSDGEVFTWGHRLVTPKRVVITRNLKKSGSIPLKFHRKERLHVVSIAAGMAHSTALTEDGALFYWISSDPDLRCQQLYAMCGRNMVSISAGKYWTAAVTATGDVYMWDGKKGKDKPLVATRMHGIKKATSVSVGETHLLIVAALYHPVYPINTIDNSQKLKSINGSSMEELNEDILFEDIDSHNSFQDDNIRQRSTPSLKSLCEKVAAESLLEPRNAIQLLEIADSLGADDLKKYCEDIVMRNLDFILSVSTHAVSSASLDILANLERLLDQRSSEPWSYRRLPTPTATLPVIIDSEEDDYEIECQRTCDKPMKMSSLKLEKVQRSDSFLQPKDDPDSEILKVVRAIRKKLQQIEMLETKQSKGHLLDDQQIAKLKSKSALESSLAELGVPVETSQNKESSSILVEGKGSKKGKSSKKQRRKSSSKSNTEQTERESVYSKSEEIPESEDLLDIDIMTTPNSKVEEDICKHSTADQGEKDLGFVVQKKDTSELLKGKGQSPKVSKKKNKKGGLSMFLSGALDEVPKEVAPPPPTPKNDGPAWGGAKFLKGSSSLREIQDQQSKIVKGNKPAEAKDKVEDLSDFGSGGKIKLSSFLHSSPIPVASTRSPQASDGDKNTPPWAASVTPPQPSRLSLRDIQMQQVKKQQGLSSSPKTKTSGFTIATGQGSPSEATGMNRWFKPEVETPSSLRSIQIEEKAMKDLKRFYSSVKIVKKQC* 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3194 1079 PRINTS Ankyrin repeat signature 111 125 IPR002110 GO:0005515
Mal3g3194 1079 PRINTS Ankyrin repeat signature 62 77 IPR002110 GO:0005515
Mal3g3194 1079 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 153 204 IPR000408 -
Mal3g3194 1079 MobiDBLite consensus disorder prediction 756 1040 - -
Mal3g3194 1079 Pfam Regulator of chromosome condensation (RCC1) repeat 315 365 IPR000408 -
Mal3g3194 1079 Pfam Regulator of chromosome condensation (RCC1) repeat 205 259 IPR000408 -
Mal3g3194 1079 Pfam Regulator of chromosome condensation (RCC1) repeat 264 311 IPR000408 -
Mal3g3194 1079 Pfam Regulator of chromosome condensation (RCC1) repeat 155 201 IPR000408 -
Mal3g3194 1079 Gene3D - 120 384 IPR009091 -
Mal3g3194 1079 Gene3D - 385 508 IPR009091 -
Mal3g3194 1079 MobiDBLite consensus disorder prediction 788 811 - -
Mal3g3194 1079 Gene3D - 25 119 IPR036770 -
Mal3g3194 1079 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 264 314 IPR000408 -
Mal3g3194 1079 PANTHER ANKYRIN REPEAT FAMILY PROTEIN / REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN 1 1078 - -
Mal3g3194 1079 SUPERFAMILY Ankyrin repeat 43 135 IPR036770 -
Mal3g3194 1079 SUPERFAMILY RCC1/BLIP-II 153 473 IPR009091 -
Mal3g3194 1079 MobiDBLite consensus disorder prediction 961 982 - -
Mal3g3194 1079 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 1 1078 - -
Mal3g3194 1079 SMART ANK_2a 95 124 IPR002110 GO:0005515
Mal3g3194 1079 SMART ANK_2a 61 90 IPR002110 GO:0005515
Mal3g3194 1079 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 315 368 IPR000408 -
Mal3g3194 1079 MobiDBLite consensus disorder prediction 828 859 - -
Mal3g3194 1079 MobiDBLite consensus disorder prediction 990 1036 - -
Mal3g3194 1079 ProSiteProfiles Ankyrin repeat region circular profile. 95 126 - -
Mal3g3194 1079 MobiDBLite consensus disorder prediction 932 947 - -
Mal3g3194 1079 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 205 263 IPR000408 -
Mal3g3194 1079 ProSiteProfiles Ankyrin repeat region circular profile. 61 92 - -
Mal3g3194 1079 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 369 424 IPR000408 -
Mal3g3194 1079 PRINTS Chromosome condensation regulator RCC1 signature 188 201 IPR000408 -
Mal3g3194 1079 PRINTS Chromosome condensation regulator RCC1 signature 264 280 IPR000408 -
Mal3g3194 1079 PRINTS Chromosome condensation regulator RCC1 signature 301 317 IPR000408 -
Mal3g3194 1079 PRINTS Chromosome condensation regulator RCC1 signature 154 170 IPR000408 -
Mal3g3194 1079 PRINTS Chromosome condensation regulator RCC1 signature 207 223 IPR000408 -
Mal3g3194 1079 PRINTS Chromosome condensation regulator RCC1 signature 414 432 IPR000408 -
Mal3g3194 1079 PRINTS Chromosome condensation regulator RCC1 signature 317 331 IPR000408 -
Mal3g3194 1079 ProSiteProfiles Ankyrin repeat profile. 95 127 IPR002110 GO:0005515
Mal3g3194 1079 ProSiteProfiles Ankyrin repeat profile. 61 93 IPR002110 GO:0005515
Mal3g3194 1079 Pfam Ankyrin repeats (3 copies) 48 126 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3194 Mal-Chr3 107664727 107671248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3194 40 135 Acyl Lipid Metabolism Gene Families AT5G53470 35.417 8.18e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3194 K24810 - gmx:100800604 1731.46