Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3190 ATGATGAAGTATAAGAACCCTAATGAGTCAATTGATATAAGGGTTGAGGATCTTATTAGTAGAATGACTCTTGAGGAGAAAATTGGTCAAATGTTACAGATTGAGCGCAAGTATGCATCTAATAATGTCCTCAAAAAGTTTTTTATAGGGAGTGTTATGAGTGAGGGAGGGAGTAAACCAGCTCCACGGGCTTCGGCTGAAAATTGGATTGATATGTTGAATGAATTTCAGAAGGATGCTTTATCAACTAGGCTTGGAATTCCAATGTTTTATGGGATTGATGCTGTTCATGGTAACAGCCCTGTTTACAAAGCAACTATTTTTCCTCACAATATTGGCCTTGGAGCTACGAGGGACCCTAATCTAGTGAAGAGAATTGGAGCTGCAACTGCACTTGAAGTTAGAGCAACAGGAATTCAATATGCTTATGCACCATGTATAGCAGTCTGTAGAGATCCAAGATGGGGTCGGTGTTACGAAAGCTACAGTGAAGATCCTAAAGTAGTTCAAGATATGACTGAAATCATATCAGGATTGCAAGGGGATGTCCCTGATAATATGCCAAAGGATGTTCCTTTTATTGCTGGAAAAGAAAAGGTTATAGCTTGTGCTAAGCACTACGTCGGTGACGGTGGCACAACCGATGGGATTGATGAGAGTAACACTGTTATTGATAGAGATGGATTGATGGAAATTCACATGCCAGGCTACTTGAGCTCCATTAGCAAGGGTGTGGCAACCATTATGGTATCTTACTCGAGTTGGAATGGAGATAAAATGCATGCTCACCATGACCTTATTACTGGCTTCCTCAAAAACACACTCCATTTCCAGGGATTTGTTATTTCAGATTTTGAGGGTATTGATAGGATCACCTCTCCATATCGTGCTAACTGCACTTATTCAGTTCAAGCAGGAGTTTCTGCTGGCATTGACATGTTCATGGTTCCAAAGTTCTACACCGAATTCATTGATGATCTAACGACATTGGTGAATAATAAATTCATTCCTATGAGTCGAATTGATGATGCGGTGAGAAGAATTTTGCGGGTTAAATTCATGATGGGTATTTTTGAGAACCCTTTTGCTGATTACAGTTTGGTCAAATATCTTGGGATTAAGGAGCATAGAGAATTGGCTAGGGAAGCTGTAAGGAAATCCATGGTCCTTCTGAAAAATGGTAAATCTGCTGAGAATCCATTGTTACCTCTTCCTAAAAAGGTTCCTAAAATACTTGTGGCTGGAAGCCATGCAAATAATCTAGGATATCAGTGTGGTGGCTGGACCATTGAATGGCAAGGAGTCAGTGGCAACAATGATCTCGAAGGGACTACAATTCTCAATGCTGTGAAAAACACTGTTGATCCAGAGACCACAGTGATCTACAAGGAGAACCCTGATAAAGAATTTGTTGAATCCAATGGATTCTCCTATGCTATAGTTGTAGTAGGAGAGCATCCTTATGCAGAAATGCATGGTGACAACATGAACCTGACAATCCCCGACCCTGGTCCTGAAACCATAACAAATGTTTGTGGAGCTATAAAATGTGTGGTTATCATTATTTCTGGCCGACCTTTAGTTATCGAACCATATGTTGGTTCGATAGATGCAGTTGTTGCTGGTTGGCTACCAGGTAGTGAAGGACAAGGTGTGGCTGATGTTTTATTTGGTGACTATGGTTTCACAGGAAAGCTTCCAAGAACATGGTTCAAAAGTGTTGATCAACTTCCAATGAATGTTGGTGATCCTCATTATGATCCCCTTTTCCCATTTGGGTTTGGTCTTTCTACCAAACCTACTAAGGCTATCTACTCTGAATAG 1824 0.4062 MMKYKNPNESIDIRVEDLISRMTLEEKIGQMLQIERKYASNNVLKKFFIGSVMSEGGSKPAPRASAENWIDMLNEFQKDALSTRLGIPMFYGIDAVHGNSPVYKATIFPHNIGLGATRDPNLVKRIGAATALEVRATGIQYAYAPCIAVCRDPRWGRCYESYSEDPKVVQDMTEIISGLQGDVPDNMPKDVPFIAGKEKVIACAKHYVGDGGTTDGIDESNTVIDRDGLMEIHMPGYLSSISKGVATIMVSYSSWNGDKMHAHHDLITGFLKNTLHFQGFVISDFEGIDRITSPYRANCTYSVQAGVSAGIDMFMVPKFYTEFIDDLTTLVNNKFIPMSRIDDAVRRILRVKFMMGIFENPFADYSLVKYLGIKEHRELAREAVRKSMVLLKNGKSAENPLLPLPKKVPKILVAGSHANNLGYQCGGWTIEWQGVSGNNDLEGTTILNAVKNTVDPETTVIYKENPDKEFVESNGFSYAIVVVGEHPYAEMHGDNMNLTIPDPGPETITNVCGAIKCVVIIISGRPLVIEPYVGSIDAVVAGWLPGSEGQGVADVLFGDYGFTGKLPRTWFKSVDQLPMNVGDPHYDPLFPFGFGLSTKPTKAIYSE* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3190 607 PRINTS Glycosyl hydrolase family 3 signature 108 127 IPR001764 GO:0004553|GO:0005975
Mal3g3190 607 PRINTS Glycosyl hydrolase family 3 signature 154 170 IPR001764 GO:0004553|GO:0005975
Mal3g3190 607 PRINTS Glycosyl hydrolase family 3 signature 270 288 IPR001764 GO:0004553|GO:0005975
Mal3g3190 607 PRINTS Glycosyl hydrolase family 3 signature 84 100 IPR001764 GO:0004553|GO:0005975
Mal3g3190 607 PRINTS Glycosyl hydrolase family 3 signature 200 216 IPR001764 GO:0004553|GO:0005975
Mal3g3190 607 Pfam Glycosyl hydrolase family 3 N terminal domain 23 351 IPR001764 GO:0004553|GO:0005975
Mal3g3190 607 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 388 597 IPR036881 GO:0004553|GO:0005975
Mal3g3190 607 Gene3D - 373 599 IPR036881 GO:0004553|GO:0005975
Mal3g3190 607 Pfam Glycosyl hydrolase family 3 C-terminal domain 388 597 IPR002772 GO:0004553|GO:0005975
Mal3g3190 607 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 1 607 - -
Mal3g3190 607 PANTHER BETA-D-GLUCOSIDE GLUCOHYDROLASE 1 607 - -
Mal3g3190 607 SUPERFAMILY (Trans)glycosidases 2 387 IPR017853 -
Mal3g3190 607 Gene3D - 1 372 IPR036962 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3190 Mal-Chr3 107559549 107563121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3190 2 602 Glycoside Hydrolase AT5G20950 71.048 0.0 873
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3190 K05349 - gmx:100779642 1078.93