Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal3g3175 | ATGAGACCACCCCTAAGAGGTGGCGGCAGTTTCGGCCGTGGTGGCGGTGGACGTGGTGGTGGATTCAGGGGTGGTCGTGATGGAGGAGGTTTTCGTGGACGTGGTGGTGGTCGATTCGGGGGTGGTGGACGGGGTGGTGGAGGTGGATTTCGTGATGAAGGTCCTCCCTCAGAAGTTGTAGAGGTTTCAACGTTTATGCATGCTTGTGAAGGAGATGCTGTTACAAAGCTTACTAATGAGAAGATTCCGTTTTTTAATGCTCCTATTTATCTGCAAAACATGACTCAGATTGGAAAAGTTGATGAAATATTTGGCCCCATCAATGAATCTTTCTTTTCAATTAAAATGATGGAAGGGATTGTTGCTACTTCATATTCAGCTGGTGACAAGTTTTACATCGACCCTAGGAAACTCTTGCCTCTAGCAAGATTTCTTCCACAGCCTAAGGGACAAGCATCAGGTGGTAGAGGTGGAGGCCGTGGAGGTGGTGGTTTTGGTAGAGGTGGTGGCCGTGGAGGCGGTGGTTTTCGTGGAAGGGGTCCCCCAAGGGGTGGAAGAGGTCCTCCTAGAGGTGGACGTGGTGGTGGTTTCAGGGGAAGGGGCAGATTCTAG | 612 | 0.5065 | MRPPLRGGGSFGRGGGGRGGGFRGGRDGGGFRGRGGGRFGGGGRGGGGGFRDEGPPSEVVEVSTFMHACEGDAVTKLTNEKIPFFNAPIYLQNMTQIGKVDEIFGPINESFFSIKMMEGIVATSYSAGDKFYIDPRKLLPLARFLPQPKGQASGGRGGGRGGGGFGRGGGRGGGGFRGRGPPRGGRGPPRGGRGGGFRGRGRF* | 204 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal3g3175 | 203 | PANTHER | NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 | 1 | 202 | - | - | |
| Mal3g3175 | 203 | MobiDBLite | consensus disorder prediction | 1 | 57 | - | - | |
| Mal3g3175 | 203 | SUPERFAMILY | Translation proteins | 60 | 134 | IPR009000 | - | |
| Mal3g3175 | 203 | MobiDBLite | consensus disorder prediction | 146 | 203 | - | - | |
| Mal3g3175 | 203 | PANTHER | H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT | 1 | 202 | - | - | |
| Mal3g3175 | 203 | Pfam | Gar1/Naf1 RNA binding region | 59 | 145 | IPR007504 | GO:0001522|GO:0042254 | |
| Mal3g3175 | 203 | Gene3D | Probable tRNA pseudouridine synthase domain | 55 | 146 | IPR038664 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal3g3175 | K11128 | - | gmx:100788981 | 211.075 |