Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3162 ATGGAAAAAGATTGGATTTTTACAATGTTGTTGATGTTAGGGTTAATGGGTTGTTGTTGTTGGTATGTTGAAGGGCTTGGTGTGAACTGGGGAACACAAGCAACACACAAGTTACCACCAGAAACTGTTGTGAAGATGTTGAAGGATAATGGGATTCAAAAAGTTAAGCTTTTTGATGCTGATGATACTACAATGAATGCTTTGGCTGGTAGTGGGATTGAAGTTATGGTTGCTATACCTAATAATCAGCTTGCTGATATGAATGATTATAAGAGGGCTCAATATTGGGTTAGGAAGAATGTTACTCGTTATACCTTTGATGGTGGTGTTAAGATCAAATATGTAGCAGTTGGGAATGAGCCATTTTTGAAATCTTACAACAATTCATTCTTGAACATCACCTTCCCGGCACTTCAGAATATTCAAAATGCCATCAACGAAGCCGGTCTTGGAGACACCATAAAGGCAACAGTACCCTTAAATGCAGATGTGTATGAGTCTCCGCAGGACAAACCTTTTCCATCTGCAGGAATATTTAGGCCTGATATCAATGGTCTCATGACTCAGATGGTACAATTTCTCAACAAGAACGGGGCACCATTTACCGTCAACATTTACCCCTTCTTAAGTCTCTATGGAAACGACGATTTCCCATTCAACTTTGCCTTCTTCGACGGGGTAGACCAACCAATAAACGACAACGGAATCCAATATACCAACGTCTTTGATGCAAACTTCGATACATTGGTTTCTGCTCTCAAGTCGGTCGGGTTCGGCAACACTCCAATTTTGGTAGGAGAAGTAGGATGGCCAACAGAAGGCGACAAGAATGCCAATACCGGCAATGCATTAAGATTCTACAATGGCCTCCTTTCTAGACTCGCGGCGAACAAAGGAACCCCTCTCCGCCCCGGATTCATCGAAGTTTATCTGTTTGGACTCATCGATGAGGACGCGAAAAGCATCGCTCCAGGGAACTTTGAGAGACACTGGGGAATATTTCGATATGATGGACAACCAAAGTTTCCGATGGATTTTTCAGGTCAAGGTCAAAACAAACTTCTAGTTGGTGCACAGGGTGTGAAGTATCTTGATTCAATGTGGTGCATGTTTAACCCTGATGCTAAAGATCTCAGCAAACTTGCTGATAACATTAACTTTGCTTGCACCTTTGGAGATTGTACTGCACTTGGGTATGGATCTTCTTGCAACAACCTTGATGCTAATGGAAATGCTTCTTATGCATTCAACATGTACTACCAGACGCAGAATCAGGATCGTCAAGCATGCAATTTTCAAGGTTTAGCTAAGCTTACTACCGACAACATTTCAACACCTACTTGCAATTTTATCGTCCAGATAGTTCCTTCTTCAGCATCTTCTTTGATGCCCTCATTTGCTGCTGTTTTGTTGTTTATTGCTTTTTCTGTGATTCTCTTGGCTTAG 1446 0.4163 MEKDWIFTMLLMLGLMGCCCWYVEGLGVNWGTQATHKLPPETVVKMLKDNGIQKVKLFDADDTTMNALAGSGIEVMVAIPNNQLADMNDYKRAQYWVRKNVTRYTFDGGVKIKYVAVGNEPFLKSYNNSFLNITFPALQNIQNAINEAGLGDTIKATVPLNADVYESPQDKPFPSAGIFRPDINGLMTQMVQFLNKNGAPFTVNIYPFLSLYGNDDFPFNFAFFDGVDQPINDNGIQYTNVFDANFDTLVSALKSVGFGNTPILVGEVGWPTEGDKNANTGNALRFYNGLLSRLAANKGTPLRPGFIEVYLFGLIDEDAKSIAPGNFERHWGIFRYDGQPKFPMDFSGQGQNKLLVGAQGVKYLDSMWCMFNPDAKDLSKLADNINFACTFGDCTALGYGSSCNNLDANGNASYAFNMYYQTQNQDRQACNFQGLAKLTTDNISTPTCNFIVQIVPSSASSLMPSFAAVLLFIAFSVILLA* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3162 481 SUPERFAMILY (Trans)glycosidases 26 346 IPR017853 -
Mal3g3162 481 PANTHER GLYCOSIDE HYDROLASE, FAMILY 17, X8 2 469 - -
Mal3g3162 481 Pfam X8 domain 368 436 IPR012946 -
Mal3g3162 481 Gene3D - 362 461 - -
Mal3g3162 481 Gene3D Glycosidases 25 353 - -
Mal3g3162 481 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Mal3g3162 481 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 2 469 IPR044965 GO:0004553|GO:0005975
Mal3g3162 481 Pfam Glycosyl hydrolases family 17 26 346 IPR000490 GO:0004553|GO:0005975
Mal3g3162 481 SMART X8_cls 367 450 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3162 Mal-Chr3 107225530 107228441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3162 6 455 Miscellaneous Gene Families AT1G64760 74.222 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3162 - - gmx:100815300 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3162 3 107225530 107228441 Mal3g3162 3 107225530 107228441 ECH