Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3161 ATGGGTGCGAGTCGAAAGCTTCAAGGAGAGATTGATCGCGTTCTCAAGAAGGTTCAAGAAGGCGTTGAAGTCTTCGACAGTATCTGGAACAAGGTTTATGATACTGACAATGCTAATCAGAAGGAGAAATTTGAGGCTGATCTCAAGAAGGAGATTAAGAAGCTGCAGAGGTATCGAGATCAGATTAAGACTTGGATTCAATCCAGTGAGATTAAGGATAAGAAGGTGAGTGCCTCGTATGAGCAGGCTCTGGTGGATGCGCGGAAGCTGATTGAACGAGAAATGGAAAGATTTAAGATATGTGAGAAGGAAACGAAGACCAAAGCATTCTCCAAAGAAGGCTTGGGTCAACAGCCTAAGACTGATCCGAGAGAGAAGGCTAAATCAGAGACGAGGGATTGGTTAAACAATGTGGTTGGAGAGTTAGAATCTCAGATTGATAACTTTGAAGCTGAGCTTGAAGGCCTTACAGTCAAGAAAGGAAAAAACAGACCTTCTAGATTGACGCATCTGGAGACATCAATTACTCGGCACAAGGCTCATATAAAAAAGTGTGAATTGGTTTTGAGACTTCTAGATAATGATGAATTGAGTCCAGAGGAGGTTAATGATGTGAAAGATTTCTTGGACGACTATGTAGAGCGTAATCAGGACGATTTTGATGAGTTTGATGATGTTGATGAACTATACAGTTCATTACCTTTAGACAAGGTTGATACTCTAGAAGATCTTGTTACAATTCCCACAAGTGTTGCAGTTGCAAAGGTGGCACCTGGTCTTAGCTTGAAAAGTCCTTTGGCAGCATCGGCATCACAGTCAGCATCATCACAAACATCTGAGCAAGCTGATGAGACAGCGTCTCAGGATAGCAATTCTGACACTGTGGCAAAAACCCCACCTCCTAAAAGTGGTGGAATTAGCTCTTCTACTTCAACACCTACTGGCAACCATGCTACTCCTGCTTCTGTAAATGTTTCAGGTCTTAACTTGTCCAGTGCACCGGCTGCTTCCATCCTTCCTGGTTCAAATTCTGTTCGAAATATCTTGGAGAATGCTGTTGTAAATCAGTCTCCCCCTTCAAAGGAAGAAGAGATTAACAACTTCCCTACCCGTAGGCCATCTCCATCGCTTTCCGATGCAGCACTTGTGAGGGGCAGAAACAGCTTGTCAAATCAAGCAACAGCCACCATCCCTCTTGGTTCTGCAAATACGGTTTCTAGTATTGGAGGCCTTGGTGCAGTTCCTTCAGCCTCAGAAATAACTAAGCGAAACATATTGGGAGCTGATGATAGACTCGGAAGTAGTGGGATGGTGCAACCTCTTGTATCCCCGCTAAGTAATAGATTGATATTGCCTCAGGTTGGGAAGGCTAATGATGGAGCTGCCTCTGTTGACTCTAGTATCATTAATGAAGCTGCAGCTGTATCTGGGAGAGTTTTCTCCCCTTCTGTGGTTCCCGGCATGCAATGGAGACCTGGAAGTCCCTTTCAGAATCAGAATGATGCAGGGCAGCTTCGTGGAAGAACTGAAATAGCTCCTGATCAAAGGGAAAAGTTTCTGCAGAAGTTTCAGCAAGTGCAACAACAAGGGCCTTGTACCCTTCTTAATATGACTTCCCTTGTTGGAGGAAACCATAAGCAGTTTTCTTCCCAACAACAAAGTCCACTTTTGCAGCAGTTCAACTCTCAAGGCTCATCTGTTTCTTCACAATCTAGTATGGGACTTGGAGCCCAATCCCCGAGTCTTGGTGGCATTTCTTCTGTCTCGCTACAGCAGCTCAACTCTGTTCATTCCCCGTCTAGTCCACATCCATTTCCAGGTGTTGCTAAAGATGCAGATAAATTTGAAGAACAGCAGCAACATCAGAATTTTCCTGATGAGTCAACAACTGAATCTACTTCTAGCACAGGGATTGGCAAGAATCTCACAGTTGAAGATGATCTGAAATCAGCATATGTACTAGATTCACCTGCTGGTTTATCTGCCCCTCTTCCAGAAGCTGCTCAAACTTTCAGAGATATTGATTTGTCACCTGGCCAACCTTTACAATCAAATCAATCTACTGGCAACCTCGGCGTCATTGGAAGAAGAAATGGTGTTGAACTTGGAGCCATTGGTGATAGCTTTGGTGCATCAAGTGTTAATTCTGGTGGAGTGCGTGATCATCTATATAATTTACAAATGCTTGAGGCAGCACACTTCAGAATGCCACAACCTAGAGACTCTGAACGTCCTAGAACCTATACTCCTAGGCACCCAGCAATTACACCTCCTAGCTATCCTCAAGTACAAGCGCCTATAGTTAACAACCCTGCCTTTTGGGAGAGATTAGGTCTTGAACCATTTGGCACAGACACCCTGTTCTTTTCATTTTATTATCAACAGAACACATACCAACAATATTTGGCTGCAAAGGAGCTAAAGAAGCAGTCTTGGAGATACCACCGAAAGTATAATACATGGTTTCAGCGGCATGAAGAGCCCAAAGTTGCTACAGATGATTTTGAGCAGGGAACATATGTGTACTTTGATTTTCATATTGCAAATGATGACCTGCAACATGGATGGTGTCAAAGAATCAAGAATGACTTTACTTTTGAGTATAATTATCTTGAAGATGAGCTTGTATAA 2631 0.4329 MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPREKAKSETRDWLNNVVGELESQIDNFEAELEGLTVKKGKNRPSRLTHLETSITRHKAHIKKCELVLRLLDNDELSPEEVNDVKDFLDDYVERNQDDFDEFDDVDELYSSLPLDKVDTLEDLVTIPTSVAVAKVAPGLSLKSPLAASASQSASSQTSEQADETASQDSNSDTVAKTPPPKSGGISSSTSTPTGNHATPASVNVSGLNLSSAPAASILPGSNSVRNILENAVVNQSPPSKEEEINNFPTRRPSPSLSDAALVRGRNSLSNQATATIPLGSANTVSSIGGLGAVPSASEITKRNILGADDRLGSSGMVQPLVSPLSNRLILPQVGKANDGAASVDSSIINEAAAVSGRVFSPSVVPGMQWRPGSPFQNQNDAGQLRGRTEIAPDQREKFLQKFQQVQQQGPCTLLNMTSLVGGNHKQFSSQQQSPLLQQFNSQGSSVSSQSSMGLGAQSPSLGGISSVSLQQLNSVHSPSSPHPFPGVAKDADKFEEQQQHQNFPDESTTESTSSTGIGKNLTVEDDLKSAYVLDSPAGLSAPLPEAAQTFRDIDLSPGQPLQSNQSTGNLGVIGRRNGVELGAIGDSFGASSVNSGGVRDHLYNLQMLEAAHFRMPQPRDSERPRTYTPRHPAITPPSYPQVQAPIVNNPAFWERLGLEPFGTDTLFFSFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDDFEQGTYVYFDFHIANDDLQHGWCQRIKNDFTFEYNYLEDELV* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3161 876 MobiDBLite consensus disorder prediction 616 640 - -
Mal3g3161 876 MobiDBLite consensus disorder prediction 355 377 - -
Mal3g3161 876 MobiDBLite consensus disorder prediction 622 640 - -
Mal3g3161 876 PANTHER CCR4 NOT-RELATED 1 875 IPR040168 GO:0030015
Mal3g3161 876 Coils Coil 41 61 - -
Mal3g3161 876 MobiDBLite consensus disorder prediction 271 320 - -
Mal3g3161 876 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
Mal3g3161 876 PANTHER BNAA10G16600D PROTEIN 1 875 - -
Mal3g3161 876 MobiDBLite consensus disorder prediction 545 583 - -
Mal3g3161 876 MobiDBLite consensus disorder prediction 355 374 - -
Mal3g3161 876 Gene3D - 718 872 IPR038635 -
Mal3g3161 876 MobiDBLite consensus disorder prediction 110 131 - -
Mal3g3161 876 PIRSF NOT_su_3_5 1 876 IPR012270 GO:0006355|GO:0030015
Mal3g3161 876 Coils Coil 132 159 - -
Mal3g3161 876 Pfam NOT2 / NOT3 / NOT5 family 733 871 IPR007282 GO:0006355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3161 K12580 - gmx:100783415 1363.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3161 3 107204862 107216305 Mal3g3161 3 107204862 107216305 ECH