Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3112 ATGAGCAGCATGAACAACAAAACAGCAAAATTGTTGAAGCAAATCATTGCTGGTTTAACCGCAATGACAAAGTCAAAAACCATTGCTTTAAAGTCCAAAATAAATGCCATAAAAGCTCGTTTGATTATATTCTCACTCATGAAGAACAAAAAGTTCCTTATGAGCTCAATTTCAGACAAGTTTCATTCTGTTTGGGGAAGCCATTCTCACCATCATTCCAAGGAAGATTGTTTAATTGAAGAAGGTGCCAAGTGTGATAATCATAATAGAGCCATAGTTGTGTATAGCAACAATGCTCACACTCACACTTATGAAGCATTGCAAAATCCAAGTGAAACTCAAGTTGTGAAAGATCAAGATCAAGATCAAGAAGATGGCTATGATGGTTACTATGTTGATGATAAGTATCCTGATTTGACTCATACTCTTTTTGATTTCGAGGGATTGGATTTTGGAGGATCAGTGATTGATAGGGTGAAGAATTGTAAGGAAGAAGCAGGGAAAGAGTTTAAACTTGAGGATGATATTGATGAAGTTGCTGATCTTTTTATTAGGAGGTTTAAAAGGAATATAATCTTGCAAAAACAAGATTCATTGAAGAGGAAGAGGGAAATCCCACAAGAGAGTACTTGA 633 0.3555 MSSMNNKTAKLLKQIIAGLTAMTKSKTIALKSKINAIKARLIIFSLMKNKKFLMSSISDKFHSVWGSHSHHHSKEDCLIEEGAKCDNHNRAIVVYSNNAHTHTYEALQNPSETQVVKDQDQDQEDGYDGYYVDDKYPDLTHTLFDFEGLDFGGSVIDRVKNCKEEAGKEFKLEDDIDEVADLFIRRFKRNIILQKQDSLKRKREIPQEST* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3112 210 Pfam Cotton fibre expressed protein 173 203 IPR008480 -
Mal3g3112 210 PANTHER COTTON FIBER PROTEIN 4 209 - -
Mal3g3112 210 PANTHER EMB|CAB67623.1-RELATED 4 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3112 Mal-Chr3 106259540 106260172 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3112 - - gmx:100807332 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3112 3 106259540 106260172 Mal3g3112 3 106259540 106260172 ECH