Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3108 ATGTCGTTTTCCACTGCCGCATCACCTCCACCGGCGTTAGAAGCCGAAACCTTACATCACGACGGTGACTCTTTCAACGTCAACGACGACGACGTTTCGTTCGATGCCATTCCACTCGACGACGAGGGTTTCCCGTCACAACTCCCAATCGAACCCGCTTCTCCAAATGAATCGGAGAAGAGCAGTTTCGCCGCCGATTTCTACCGCTGCGGGTCCGATTTCTCCTCTCTATTGTCACCAGAACGCGATTCGTTATCTTCGGGGAAGAAACTGAAGCAGGCGAATTTGTTTCAGATTTGGGGATTCAAAAGAAATGTTGAAGTTGGTTCTGTTGAATCCCCAAATCAAGGTGGTTATTGTGATGATGTTGGTGAAGGAAGTATTTCATCTGAGAAGAAAATTGTTAAAAGTGGAAATTGGGGTTCGATTTTGCGTGATAAAGGGAAAGTTGTTGAGAATTCAAAATCTTCTGGGAAAAGAAAGAGTTTTTATGGAGAAAATAGGGTTGCACGTTCCTGTCCCTTTTATAAGAAAATGCCAGGGACAAACTTCACAGTTGATGCTTTTCGTTATGGATGTATTGATGAATGTTCAGCTTACTTTCTTAGTCATTTTCATGCCGATCACTATGGTGGTCTTAGCAAGAAATGGTCACATGGGCCTATTTATTGCTCTCCTCTTACCGGACGGCTAGTTCAAATGTGTCTCTATGTAAACCCTTCGTATATCTGCCCTTTGGAATTTGACACTGAATATGTGATTGATGGTATCAAAGTGACTTTGATAGATGCTAATCATTGCCCTGGTGCAGCTTTGATTCACTTTGAGCTCCCAAATGGACAGTGCTATTTGCACACTGGGGACTTTAGAGCTTGTAAACTAATGCAAGGCTACCATCTTTTTGTAAATAAACGTGTAAATGTACTTTATTTGGATACTACATATTGCAACCCAAAGTACAAGTTTCCTTTTAAGGAAGATGTACTCAAGTATGTTGTCAAAATTACAAAGAACCACCTCAAAAAGTATCCCAGAACTTTAGTGGTTGTTGGAGCATACAGTATTGGCAAAGAATGTGTATATCTTGCAATTTCTAAGGCACTTGGGGTAAAAATCTATGTGAATGCTTCAAGAAGAAAGATATTGCTAGCTTATGATTGCCCTGACTATTCAGATAGACTCTGTACAAATGGAAATAACACACTTCTCCATGTTCTGCCCATGTCATCTCTGAGAATTGAGACTTTGAAGGAATACTTGAAGACCTACCAGGAACAATTTACATCAGTATTAGCATTTCGTCCAACAGGTTGGACTTTCAGTGAGAAGATAGGCAATGATCTGGAACTAATAAAACCTGTTTCCAACGGAAATATCGCAACATATGGGGTTCCCTACAGTGAGCACTCCAGCTTTACAGAACTGCGAGATTTTGTTCAGTTTTTGAAGCCTGACAAGATAATTCCTACTGTGAATGTTGGGAATGCTGCTAATCGAGAAAAGATGCAATCTTACTTTCGAGACTGGTTGAAGGGCTAA 1539 0.4094 MSFSTAASPPPALEAETLHHDGDSFNVNDDDVSFDAIPLDDEGFPSQLPIEPASPNESEKSSFAADFYRCGSDFSSLLSPERDSLSSGKKLKQANLFQIWGFKRNVEVGSVESPNQGGYCDDVGEGSISSEKKIVKSGNWGSILRDKGKVVENSKSSGKRKSFYGENRVARSCPFYKKMPGTNFTVDAFRYGCIDECSAYFLSHFHADHYGGLSKKWSHGPIYCSPLTGRLVQMCLYVNPSYICPLEFDTEYVIDGIKVTLIDANHCPGAALIHFELPNGQCYLHTGDFRACKLMQGYHLFVNKRVNVLYLDTTYCNPKYKFPFKEDVLKYVVKITKNHLKKYPRTLVVVGAYSIGKECVYLAISKALGVKIYVNASRRKILLAYDCPDYSDRLCTNGNNTLLHVLPMSSLRIETLKEYLKTYQEQFTSVLAFRPTGWTFSEKIGNDLELIKPVSNGNIATYGVPYSEHSSFTELRDFVQFLKPDKIIPTVNVGNAANREKMQSYFRDWLKG* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3108 512 Gene3D - 180 491 IPR036866 -
Mal3g3108 512 SUPERFAMILY Metallo-hydrolase/oxidoreductase 195 505 IPR036866 -
Mal3g3108 512 CDD SNM1A-1C-like_MBL-fold 161 318 - -
Mal3g3108 512 MobiDBLite consensus disorder prediction 1 58 - -
Mal3g3108 512 PANTHER DNA CROSS-LINK REPAIR PROTEIN SNM1 72 511 - -
Mal3g3108 512 Gene3D - 321 469 - -
Mal3g3108 512 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 72 511 - -
Mal3g3108 512 Pfam DNA repair metallo-beta-lactamase 391 495 IPR011084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3108 Mal-Chr3 106221454 106224499 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3108 K15340 - gmx:100790844 793.497