Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3098 ATGGGGTTAAAGCCGAAGGAGGAGCCGGTGAAAAAACCGGGTCCAGTAACAATGGATCATGTTTTACTGGCATCACAAGAGACAAAGGAAGAAAGGGATAAGAGAATTCGAAGCCTTTTCGCGTTTTTCGATAAGGAAAATCTCGGTTATTTGGAATTTGTACACATTGAAGCTGGTTTATCGGCTTTGGAGATTCCTTCGGAGTATAAATACGCGACGGATTTGTTGAATGCTTGTGATACAAACAAAGATGGACGTGTTGATTTTGTTGAGTTTAAGAGGTATATGGATGATAAAGAGCTCGAGCTTTATCGGATTTTTCAGGCTATTGATGTTGAGCATAATGGTGGCATTTTGCCGGAGGAGTTGTGGGAAGCACTTGTGAGAGCAGGGATTAAAATTGATGACGAGGAACTAGCTCATTTCGTCGAGCGTGTTGACAAGGATCATAATGGTGTTATAACATTTGAGGAATGGAGGGATTTTCTGCTGCTTTATCCGCATGAGGCAACTATTGAGAACATTTACCATTATTTGGAGCGGATATGCATGGTCGATATCGGGGAACATACTGTTATTCCCGCAGGTGTTGGTAAGCACGTTCATGCAAGTAGGTATCTGATTGCAGGAGGAGTGGCAGGTGCTGCATCACGGACAGCAACTGCACCTCTCGACCGTCTTAAGGTTGTATTGCAAGTCCAAACAACAAGTGCTCGTATAAGGCCTGCAGTAAAAGCTCTTTGGAAAGAAGGTGGTTTAGTAGGATTTTTTCGAGGCAATGGCTTAAATGTTCTTAAGGTGGCCCCTGAGAGTGCCATTAGATTTTATACCTATGAGATGATGAAGACCTTCATTGTGGATGCTAAAGGAGGAGAGGGAAAGGCTGATATTGGAGGTATGGGGCGGCTGATGGCTGGCGGTGTAGCTGGAGCTGTAGCTCAAACTGCTATATATCCTATGGATCTTGTTAAGACACGACTACAAACATATACTTGTGCTAGTGGAAAAATTCCTAGCCTTGGAACCCTTACAAAAGATATATGGGTTCAGGAAGGACCCCGGGCTTTTTATAGGGGATTGATTCCTTCTATTATTGGGATTATCCCGTATGCTGGGATAGATCTAGCTGCTTATGAAACCTTGAAGGATATGTCCAAAAAGTATATTATTCAGGATGGAGAACCTGGCCCTCTGGTACAATTAGGATGTGGGACGGTATCAGGAGCTCTTGGAGCAACATGTGTTTACCCATTACAGGTCGTTAGAACGAGAATGCAGGCCCAAAGCTCTTATAAAGGAATGGCTGATGTATTCAGGAAAACCTTGGAACATGAAGGATTTAGAGGATTCTACAAAGGAATATTTCCCAACTTGCTCAAAGTTGTTCCATCAGCAAGTATCACTTACATGGTTTACGAGTCTATGAAAAAAAGTTTGGATTTGGAGTGA 1449 0.4286 MGLKPKEEPVKKPGPVTMDHVLLASQETKEERDKRIRSLFAFFDKENLGYLEFVHIEAGLSALEIPSEYKYATDLLNACDTNKDGRVDFVEFKRYMDDKELELYRIFQAIDVEHNGGILPEELWEALVRAGIKIDDEELAHFVERVDKDHNGVITFEEWRDFLLLYPHEATIENIYHYLERICMVDIGEHTVIPAGVGKHVHASRYLIAGGVAGAASRTATAPLDRLKVVLQVQTTSARIRPAVKALWKEGGLVGFFRGNGLNVLKVAPESAIRFYTYEMMKTFIVDAKGGEGKADIGGMGRLMAGGVAGAVAQTAIYPMDLVKTRLQTYTCASGKIPSLGTLTKDIWVQEGPRAFYRGLIPSIIGIIPYAGIDLAAYETLKDMSKKYIIQDGEPGPLVQLGCGTVSGALGATCVYPLQVVRTRMQAQSSYKGMADVFRKTLEHEGFRGFYKGIFPNLLKVVPSASITYMVYESMKKSLDLE* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3098 482 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 48 479 - -
Mal3g3098 482 PANTHER SOLUTE CARRIER FAMILY 25 48 479 - -
Mal3g3098 482 Gene3D Mitochondrial carrier domain 197 480 IPR023395 -
Mal3g3098 482 ProSiteProfiles Solute carrier (Solcar) repeat profile. 395 478 IPR018108 -
Mal3g3098 482 ProSiteProfiles EF-hand calcium-binding domain profile. 67 102 IPR002048 GO:0005509
Mal3g3098 482 ProSiteProfiles EF-hand calcium-binding domain profile. 31 66 IPR002048 GO:0005509
Mal3g3098 482 Gene3D - 114 189 - -
Mal3g3098 482 PRINTS Mitochondrial carrier protein signature 206 219 IPR002067 GO:0055085
Mal3g3098 482 PRINTS Mitochondrial carrier protein signature 312 330 IPR002067 GO:0055085
Mal3g3098 482 PRINTS Mitochondrial carrier protein signature 219 233 IPR002067 GO:0055085
Mal3g3098 482 PRINTS Mitochondrial carrier protein signature 404 426 IPR002067 GO:0055085
Mal3g3098 482 PRINTS Mitochondrial carrier protein signature 259 279 IPR002067 GO:0055085
Mal3g3098 482 PRINTS Mitochondrial carrier protein signature 357 375 IPR002067 GO:0055085
Mal3g3098 482 ProSiteProfiles Solute carrier (Solcar) repeat profile. 297 384 IPR018108 -
Mal3g3098 482 SUPERFAMILY Mitochondrial carrier 199 473 IPR023395 -
Mal3g3098 482 Pfam Mitochondrial carrier protein 300 387 IPR018108 -
Mal3g3098 482 Pfam Mitochondrial carrier protein 396 479 IPR018108 -
Mal3g3098 482 Pfam Mitochondrial carrier protein 201 287 IPR018108 -
Mal3g3098 482 Pfam EF-hand domain pair 102 161 IPR002048 GO:0005509
Mal3g3098 482 Gene3D - 3 104 - -
Mal3g3098 482 ProSiteProfiles Solute carrier (Solcar) repeat profile. 201 284 IPR018108 -
Mal3g3098 482 SMART efh_1 71 99 IPR002048 GO:0005509
Mal3g3098 482 SMART efh_1 138 166 IPR002048 GO:0005509
Mal3g3098 482 SMART efh_1 35 63 IPR002048 GO:0005509
Mal3g3098 482 SMART efh_1 102 130 IPR002048 GO:0005509
Mal3g3098 482 SUPERFAMILY EF-hand 26 195 IPR011992 -
Mal3g3098 482 Pfam EF-hand domain pair 66 98 IPR002048 GO:0005509
Mal3g3098 482 ProSitePatterns EF-hand calcium-binding domain. 147 159 IPR018247 -
Mal3g3098 482 ProSitePatterns EF-hand calcium-binding domain. 80 92 IPR018247 -
Mal3g3098 482 ProSiteProfiles EF-hand calcium-binding domain profile. 134 169 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3098 Mal-Chr3 106128821 106131742 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3098 8 482 EF-hand Containing Proteins AT5G51050 72.689 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3098 K14684 - gmx:100775805 825.083