Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3097 ATGTCGTTTGTGCCAGCAAGAACGGGGAGACAAAGACAACGTTATGAAGACAACCTTCGACTTGTTTCTGGATGTATTCCATATAGATTGAGAAAAGAGAATGCAGATCAGAATGGAAAAACTGAAGAAATAATAGAAGTACTTATGGTTTCTTCCCCAAAACGTGACGACCTTGTATTTCCAAAGGGTGGTTGGGAGGACGATGAAACTGTTACAGAAGCTGCTTCTCGCGAAGCTTTAGAAGAAGCAGGAGTTAAAGGAATACTAAGAGAAAATCCATTAGGAATATGGGAGTTTCGAAGCAAAAGCAGTCAGGACTTGTGTAGCATGGAAGGAGGCTGCAGAGGATACATGTTTGCCTTGGAGGTGACCGAAGAACTCGAGGCTTGGCCGGAGCAGAAAAACCGTGCTCGCCAATGGTTAACCATAAAAGAGGCGTTTAGACTCAGCCGATATGATTGGATGTGTAACGCACTTAAGGAGTTTTCGAGAGTTATGGCAGAGGATACAAAGCTTGAGAAGCAAGACAAGAATGTCGACCCCCCTTCAGTTCTAGTAACCGATGTCTCAGAATGTTATAAAAGATCCTCTAATAAGCAGCACCACGGCGTGCCTTCTAAATCCAATCTACTGCAACGCACATCTCCAGAGATAGCCATCCATTTTAGCTATTGA 675 0.437 MSFVPARTGRQRQRYEDNLRLVSGCIPYRLRKENADQNGKTEEIIEVLMVSSPKRDDLVFPKGGWEDDETVTEAASREALEEAGVKGILRENPLGIWEFRSKSSQDLCSMEGGCRGYMFALEVTEELEAWPEQKNRARQWLTIKEAFRLSRYDWMCNALKEFSRVMAEDTKLEKQDKNVDPPSVLVTDVSECYKRSSNKQHHGVPSKSNLLQRTSPEIAIHFSY* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3097 224 PANTHER NUDIX HYDROLASE 12, MITOCHONDRIAL 1 190 - -
Mal3g3097 224 SUPERFAMILY Nudix 17 166 IPR015797 -
Mal3g3097 224 Pfam NUDIX domain 42 154 IPR000086 -
Mal3g3097 224 ProSitePatterns Nudix box signature. 63 84 IPR020084 GO:0016787
Mal3g3097 224 CDD Nudix_Hydrolase_9 21 155 - -
Mal3g3097 224 ProSiteProfiles Nudix hydrolase domain profile. 18 163 IPR000086 -
Mal3g3097 224 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 165 - -
Mal3g3097 224 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 1 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3097 Mal-Chr3 106101309 106105055 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3097 K07766 - gmx:100794003 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3097 3 106101309 106105055 Mal3g3097 3 106101309 106105055 ECH