Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3086 ATGTTGAGGGTTGCAGCTAAGAAGCTTTCTTCTCTCTCCGCATCTCCCTCATGGAGGTCTTACCACGCCGCCTCCTCTTTCCTTTCTAAGAACCCCATCGCACCGACTTCTTCCACCTCCGATGAACGCAGATCTGACCCCTTCTCGATCCATCCTGAATTCTTTCTTCCATTCAGAGGTTTTGCTACTGAGTCTCTGATGCACACAAAAGAAAACAGCATTATTCCTGAAATTCCCGCAACTGTTACAGCTGTTAAAAATCCTTCTTCTAAGATTGTATATGATGAACACAACCATGAACGGTTTCCTCCTGGTGACCCAAGCAAGAGGGCATTTGCATACTTTGTCTTAACAGGTGGAAGGTTTGCTTATGCCTCTCTGATCCGTTTGCTTGTCCTCAAGTTTGTGCTCAGCATGTCGGCAAGTAAGGATGTTCTTGCTATGGCTTCACTTGAAGTTGATCTGTCCAGCATTGAGCCAGGCTCGACTGTCACTGTTAAGTGGCGTGGAAAGCCAGTATTCATCAGGCGCAGAACCGATGACGATGTGAAGTTGGCAAACAGTGTTGATGTTGGATCTCTTCGTGACCCTCAGGAAGATTCTGAAAGAGTCAAGAACCCAGAATGGCTTGTTGTGGTTGGTGTTTGCACACATCTGGGTTGCATTCCCTTGCCAAATGCTGGAGACTTTGGTGGATGGTTTTGCCCATGTCATGGATCGCATTACGATATTTCTGGCAGAATTAGGAAGGGACCTGCACCATACAATCTGGAGGTACCAACTTATTCATTCTTGGAGGAAAACAAGTTGTTGATCGGTTAA 822 0.4623 MLRVAAKKLSSLSASPSWRSYHAASSFLSKNPIAPTSSTSDERRSDPFSIHPEFFLPFRGFATESLMHTKENSIIPEIPATVTAVKNPSSKIVYDEHNHERFPPGDPSKRAFAYFVLTGGRFAYASLIRLLVLKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTDDDVKLANSVDVGSLRDPQEDSERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3086 273 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 1 273 - -
Mal3g3086 273 SUPERFAMILY ISP domain 135 272 IPR036922 GO:0051537
Mal3g3086 273 SUPERFAMILY ISP transmembrane anchor 90 146 - -
Mal3g3086 273 TIGRFAM Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 130 273 IPR006317 GO:0008121
Mal3g3086 273 Pfam Rieske [2Fe-2S] domain 156 259 IPR017941 GO:0051537
Mal3g3086 273 Gene3D - 142 273 IPR036922 GO:0051537
Mal3g3086 273 CDD Rieske_cytochrome_bc1 150 273 - -
Mal3g3086 273 Pfam Ubiquinol cytochrome reductase transmembrane region 95 144 IPR004192 GO:0008121
Mal3g3086 273 PRINTS Rieske 2Fe-2S subunit signature 245 257 IPR005805 GO:0016020|GO:0051537
Mal3g3086 273 PRINTS Rieske 2Fe-2S subunit signature 211 222 IPR005805 GO:0016020|GO:0051537
Mal3g3086 273 PRINTS Rieske 2Fe-2S subunit signature 233 245 IPR005805 GO:0016020|GO:0051537
Mal3g3086 273 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 203 271 IPR017941 GO:0051537
Mal3g3086 273 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 1 273 IPR014349 GO:0051537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3086 K00411 - gmx:100806917 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3086 3 105896129 105899063 Mal3g3086 3 105896129 105899063 ECH