Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2708 ATGGCTTCTTTTAGAGTTTCAACTTATGTTGTGTTCTTCTTCTCTGTGTTCATGGTTCTTTTCACTTTGAGTTTTGCTGGTGATATAGTACATCATGATAGTATTGCTCCCAAGAAACCTGGATGTGACAACAACTTTGTTCTGGTTAAAGTTCCAATTAGGATTGATAATGTGGAAAGTGGCGAGTATGTCGGTGTTGGTGCAAGATTTGGACCTACATTGGAATCAAAAGAAAAGCGTGCTAACCATACTAGAGTTGCCATTGCAGACCCTCCTGATTGTTGTAGCAAACCTAAGAATAAGCTCACGGGCGAGATCATTTTGGTGTACCGAGGACAATGTAGTTTCACAACAAAGGCAAATATAGCTGAAGAAGCTGGTGCTTCAGCCATCCTGATTATAAATAACTCTCCAGGACTTTTCAAGATGGTTTGTGAAAATGAAACCGATATTGATATTGGAATACCTGCTGTCATGCTTCCACAAGATGCTGGTGAAGCCTTGAAAAATTATATACAAAACAAGTCCACAGTTTCTGTGCAGTTATACTCTCCACGACGTCCACAGGTCGATGTTGCAGAAGTATTTTTATGGCTTATGGCTGTTGGTACCATTCTCTGTGCTTCTTACTGGTCTGCCTGGAGTGCAAGAGAGGGTGTTATTGAGCGAGAGAAGCTATTAAAGGATGATTCAGATGAGCTTCTAAATCTAGAGAATGATGGTACCAGTGCTTATTTGGAAATAAGCACAGTGATAGCACTTTCATTCGTTGTGATTGCTTCTTGTTTCTTGTATATGCTTTACAAACTAATGGGAAAATGGTTTATTGATGTTCTGGTGGTTCTGTTTTGTATTGGTGGTGTTGAGGGACTGCAAACTTGCTTAGTGGCTCTTTTATCACATTTCAGATGGTCTCAACATGCTGCACAAACATATGTGAAAATACCCTTCTTCGGTGCTGTTTCATATCTCACTCTAGCTGTTACCCCCTTCTGCATAGTGTTCGCTGTGGTTTGGGGAGTTAAACGCCGTGTATCGTTTGCTTGGATCGGTCAAGATATTCTTGGTATCGCTTTGATAATTACGGTTCTTCAGATTGTCCAAATACCAAACCTCAAGGTTGGAACTGTTCTTCTCAGCTGCGCCTTCCTATATGATATCTTCTGGGTGTTTGTCTCTAAATTGATTTTTCATGAGAGTGTGATGATAGTAGTGGCTCGCGGTGATAAGAGTGGAGAAGATGGTATCCCCATGTTGCTCAAGATACCGCGTTTATTCGATCCTTGGGGTGGTTACAGTGTCATCGGTTTCGGGGACATAATCTTACCAGGGCTTGTAGTAGCATTTTCATTAAGGTATGATTGGTTAGCGAAGAGGAACCTTCGAGCAGGATACTTCTTGTGGACGATGAGTGCCTATGGTTTAGGTCTCCTTGTCACATACATAGCTTTGAATTTGATGGATGGGCATGGTCAACCAGCTTTGCTGTATATAGTTCCATTCACACTTGGAACCTTTTTGTCATTGGGAAAGAAGAGAGGTGAACTTGAGATTTTATGGACAACAGGGCTGCCAAAAATGCCTTGCCCTCACATCCAAGAGGATCATCAAGTCGACGAGTAA 1623 0.4159 MASFRVSTYVVFFFSVFMVLFTLSFAGDIVHHDSIAPKKPGCDNNFVLVKVPIRIDNVESGEYVGVGARFGPTLESKEKRANHTRVAIADPPDCCSKPKNKLTGEIILVYRGQCSFTTKANIAEEAGASAILIINNSPGLFKMVCENETDIDIGIPAVMLPQDAGEALKNYIQNKSTVSVQLYSPRRPQVDVAEVFLWLMAVGTILCASYWSAWSAREGVIEREKLLKDDSDELLNLENDGTSAYLEISTVIALSFVVIASCFLYMLYKLMGKWFIDVLVVLFCIGGVEGLQTCLVALLSHFRWSQHAAQTYVKIPFFGAVSYLTLAVTPFCIVFAVVWGVKRRVSFAWIGQDILGIALIITVLQIVQIPNLKVGTVLLSCAFLYDIFWVFVSKLIFHESVMIVVARGDKSGEDGIPMLLKIPRLFDPWGGYSVIGFGDIILPGLVVAFSLRYDWLAKRNLRAGYFLWTMSAYGLGLLVTYIALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELEILWTTGLPKMPCPHIQEDHQVDE* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2708 540 SUPERFAMILY PA domain 101 176 IPR046450 -
Mal3g2708 540 SMART psh_8 244 513 IPR006639 GO:0004190|GO:0016021
Mal3g2708 540 Gene3D - 44 186 - -
Mal3g2708 540 PANTHER SIGNAL PEPTIDE PEPTIDASE 13 537 IPR007369 GO:0004190|GO:0016021
Mal3g2708 540 Pfam Signal peptide peptidase 245 522 IPR007369 GO:0004190|GO:0016021
Mal3g2708 540 Pfam PA domain 92 168 IPR003137 -
Mal3g2708 540 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 13 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2708 Mal-Chr3 100428346 100433884 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2708 K09597 - gmx:100808921 902.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2708 3 100428346 100433884 Mal3g2708 3 100428346 100433884 ECH
Mal3g2708 3 100428346 100433884 Mal5g1352 5 24117940 24123299 PCT