Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal3g2668 | ATGGCAGAGACACAAGTGAAGGCAGAATCATCTAGTTCAGCTACACCTCCGGTTGTAGTTGAAGCACCATCAAATAATGCTTCTGAAACGGCTAAGGTTGTTGAGGAATCTAAATCTCTTGCGGTTGTAGCTCAGCCTCAGAAGACACCAGTTCCTGAAAACAAGGCAAGCTCAAAAGGAGGATCCTTTGATAGGGATATTGCTTTAGCAGAAGTTTCCAAAGAGAAAAGGCTATCTTATGTGAAGGCATGGGAAGAAAGTGAAAAAGCCAAAGCAGATAACAAAGCTCAAAAGCACATATCTTCCATTGCTGCTTGGGAAGACAGCAAAAAGGCAGGTCTTGAAGCTGAGCTCAAAAAGTTTGAGGAACAACTAGAGAAAAAGAAAGCACGATATGGTGAAATGATGAAAAACAAGATAGCCTTAGTTCACAAGGAAGCAGAGGAGAAGAGGGCAGTGATTGAAGCCAAACGAGGTGAAGAGGTTCTTAAGGTAGAGGAAATGGCTGCTAAATATCGTGCAACTGGAACCACTCCAAAGAAGACCATTGGATGTTTTTGA | 561 | 0.4242 | MAETQVKAESSSSATPPVVVEAPSNNASETAKVVEESKSLAVVAQPQKTPVPENKASSKGGSFDRDIALAEVSKEKRLSYVKAWEESEKAKADNKAQKHISSIAAWEDSKKAGLEAELKKFEEQLEKKKARYGEMMKNKIALVHKEAEEKRAVIEAKRGEEVLKVEEMAAKYRATGTTPKKTIGCF* | 187 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal3g2668 | 186 | PANTHER | OS02G0117200 PROTEIN | 1 | 186 | - | - | |
| Mal3g2668 | 186 | Pfam | Remorin, C-terminal region | 76 | 181 | IPR005516 | - | |
| Mal3g2668 | 186 | Coils | Coil | 111 | 138 | - | - | |
| Mal3g2668 | 186 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
| Mal3g2668 | 186 | MobiDBLite | consensus disorder prediction | 43 | 62 | - | - | |
| Mal3g2668 | 186 | Pfam | Remorin, N-terminal region | 18 | 72 | IPR005518 | - | |
| Mal3g2668 | 186 | PANTHER | CARBOXY-TERMINAL REGION REMORIN | 1 | 186 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal3g2668 | Mal-Chr3 | 99745265 | 99747229 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal3g2668 | - | - | gmx:100305679 | 251.136 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Mal3g2668 | 3 | 99745265 | 99747229 | Mal1g2028 | 1 | 26611908 | 26613940 | ECH | |
| Mal3g2668 | 3 | 99745265 | 99747229 | Mal3g2668 | 3 | 99745265 | 99747229 | ECH | |
| Mal6g0193 | 6 | 2744369 | 2749497 | Mal3g2668 | 3 | 99745265 | 99747229 | ECH | |
| Mal7g4901 | 7 | 117672726 | 117675012 | Mal3g2668 | 3 | 99745265 | 99747229 | ECH | |
| Mal3g2668 | 3 | 99745265 | 99747229 | Mal5g1398 | 5 | 25001568 | 25005711 | PCT |