Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2600 ATGCCGCTCAACAACAGAACCAAAGGAGGATCTCCTTTTCCTCTTCTCGCTTTCGTTCTCCTCTGTCTTCTTGCACCTCTCGTTTTCTTCTTCGCTTCATCGCTTCACACTTCTTCTTCTTCCGATCACAATGATATTTCAGATGATACAAGCCAACAGGCTTCCAAATGGAGAGAACAGAAGGCACTACACGACCTTAAATCTCTTTTTCCAAAAGAGGTTCTTGATGTTATTATGTCCAGCACAAATGATATGGGGCCTTTAAGTCTGGAAAATTTCAGAAATAATCTTTCTGCTTCATGGAGAGTTGTTGGGTTAAAGACTTCAAATGCAACACATCAGCTAAACCAACCAGAAACACTTCTTAGACAAGAAAATCAAAAGGAGAAGGAAGGAAGATCTTCAGTTGGTCTTCCTCAGTGGACTGATAGTCCTGTAAGGCTAGCCAGAAGGCAATTAATAGAGAAAAGGATGGCAAAGCGGGCCGCTGAGTTGGTAAAACAGGATGATGAAGTAGTTGTAAAACTTGAAGATTTAGCTATTGAACGTTCAAAATCAGTTGATTCAGCAGTTCTAGGTAAATACAACATTTGGAGGAAAGAAAATGAAAATGAGAATGCTGATTCTACCGTTCGGTTGATGCGAGATCAGATCATTATGGCTAGGGTATACTTGAGCCTTGCAAAGATGAAGAACAAGCTTGAATTGTACCAAGAACTGCAAACACGGCTTAAAGAGAGTCAGCGTGCTTTAGGTGAGGCAACTTCTGATGCTGACCTACACCAGAGTGAACATGAAAAAATCAAAGCTATGGGTCAAGTTCTTTCTAAGGCAAAAGATCAATTGTATGACTGCAAGTTGGTTATTGGGAAATTGAGAGCAATGCTACAAACTGCTGATGAGCAGGTTAGAGGCTTGAAGAAACAAAGCACATTCCTTAGTCAGTTGGCTGCCAAGACCATACCAAATGGAATTCACTGCTTATCGATGCGCCTTACCATAGATTACTACCTCCTCCCACCTCAAAAGAGAAAGTTCCCTATGTCTGAGAATCTGGTTAATCCCAGTCTTTATCATTACGCCCTATTCTCAGACAATGTTTTGGCTGCATCCGTTGTTGTCAACTCAACTGTTGTGAATGCAAAGGATCCTTCAAAGCATGTGTTTCACCTTGTTACCGATAAACTAAATTTTGGAGCCATGAACATGTGGTTTTTATTGAATCCTCCTGGCAAAGCTACAATTAATGTTGAAAATGTTGATGAATTTAAGTGGTTGAACTCATCTTACTGCCCAGTCTTGAGACAGCTTGAATCCGCAACAATGAAAGAGTATTATTTCAAGGCAGGCCACCCATCCACTACTGGTGCTTCTAATCTCAAATACAGAAATCCAAAATATCTTTCAATGCTCAACCACCTGAGGTTCTATCTTCCACAAGTTTATCCGAAATTGGATAAGATTCTTTTTCTTGATGATGACATTGTTGTCCAGAAAGATTTGACTGGATTATGGAATGTGGATCTTCATGGAAAAGTAAACGGTGCAGTTGAAACATGTGGTGAGAGCTTTCATCGATTTGACAAGTATCTTAACTTCTCAAATCCACATATTGCAAAAAACTTTGATCCCAATGCTTGTGGTTGGGCATACGGAATGAACATGTTTGATTTGAAGGTGTGGAAAAAGAAGGACATTACTGGCATATATCACAGGTGGCAGAATTTGAATGAAGACAGGGTACTATGGAAACTAGGGACATTGCCTCCAGGTCTAATGACATTCTATGGATTAACACATCCCCTAAATAAATCATGGCATGTACTCGGTTTGGGTTACAGTCCAAGTATAGATCGTACAGAGATTGAGAATGCAGCAGTTGTACACTACAACGGTAATATGAAGCCATGGTTAGAGATAGCCATGACAAAGTATCGCCCTTACTGGACCAAATATGTCAAGTATAACCATCCTTATCTTAGGAACTGTAAGCTAAGTGAATGGTCTTGA 2010 0.401 MPLNNRTKGGSPFPLLAFVLLCLLAPLVFFFASSLHTSSSSDHNDISDDTSQQASKWREQKALHDLKSLFPKEVLDVIMSSTNDMGPLSLENFRNNLSASWRVVGLKTSNATHQLNQPETLLRQENQKEKEGRSSVGLPQWTDSPVRLARRQLIEKRMAKRAAELVKQDDEVVVKLEDLAIERSKSVDSAVLGKYNIWRKENENENADSTVRLMRDQIIMARVYLSLAKMKNKLELYQELQTRLKESQRALGEATSDADLHQSEHEKIKAMGQVLSKAKDQLYDCKLVIGKLRAMLQTADEQVRGLKKQSTFLSQLAAKTIPNGIHCLSMRLTIDYYLLPPQKRKFPMSENLVNPSLYHYALFSDNVLAASVVVNSTVVNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPGKATINVENVDEFKWLNSSYCPVLRQLESATMKEYYFKAGHPSTTGASNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWNVDLHGKVNGAVETCGESFHRFDKYLNFSNPHIAKNFDPNACGWAYGMNMFDLKVWKKKDITGIYHRWQNLNEDRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYSPSIDRTEIENAAVVHYNGNMKPWLEIAMTKYRPYWTKYVKYNHPYLRNCKLSEWS* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2600 669 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 360 661 IPR029044 -
Mal3g2600 669 MobiDBLite consensus disorder prediction 37 51 - -
Mal3g2600 669 CDD GT8_like_1 358 654 - -
Mal3g2600 669 SUPERFAMILY Nucleotide-diphospho-sugar transferases 358 664 IPR029044 -
Mal3g2600 669 Coils Coil 289 309 - -
Mal3g2600 669 PANTHER HEXOSYLTRANSFERASE 7 667 - -
Mal3g2600 669 Coils Coil 227 257 - -
Mal3g2600 669 Pfam Glycosyl transferase family 8 327 641 IPR002495 GO:0016757
Mal3g2600 669 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 7 667 IPR029993 GO:0047262
Mal3g2600 669 MobiDBLite consensus disorder prediction 37 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2600 Mal-Chr3 98593766 98598303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2600 7 667 Glycosyltransferase AT3G61130 73.605 0.0 1020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2600 K13648 - gmx:100798073 1126.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2600 3 98593766 98598303 Mal3g2600 3 98593766 98598303 ECH
Mal3g2600 3 98593766 98598303 Mal5g1592 5 31104668 31111567 PCT