Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2366 ATGCAGAAATTCCATCTGGGTCTCTCTCAAATCCCTCATTCACCATCAATGGAGGAAGATTCTTCATCTTCCATGTCAATCCTAAGCACACCCTTCTTAGAAACTCCAAAAAAATCTACCCCAAAACCAAACAAAAGAACCATAGTCACAACATTAATGGAAGCTGCAACTTTCACATCCTCTTCCTTCAAAGAAGACACCTATTACATTTCCAACCTCAAATCCTCAGAGAAGAAAGCATTGCAAGAGTTGAAGAAAAAGCTCTTAGCTTCTGATGAAATCAACAACAACAATGGTTCTATGTGGGGTGTTTGTTTGATCAATGGTGATGAAGTTGCTGATGTATTGCTTTTGAAGTTTCTTAGAGCTAGAGATTTTAGAGTCAATGATGCTTTCACCATGCTTGTGAAGTGTCTTTCTTGGAGGAAAGAGTTTGGTGCTGAAAATGTTGTGGATGAAGATTTGGGATTCAAAGAGCTTGAAGGTGTTGTAGCTTTTACTCATGGATTTGATAGAGAGGGACACCCTGTGTGTTACAATCATTATGGTGTGTTCAAAGATAAGAACATGTATGAGAGGATTTTTGGTGATGAAGAGAAGTTGAAGAAGTTTTTGAGGTGGAGGGTTCAAGTTCTTGAGAGAGGGATCAAGCTTTTACAGTTTAAGCCTGGTGGGGTGAATTCTTTGATTCAAGTCACTGATCTTAAGGATATGCCTAAGAGTGAGTTAAGGGCTGTTTCAAATCAAATTCTTTCATTGTTTCAAGATAACTATCCTGAAATGGTTGCTCGTAAGATTTTCATCAATGTGCCATGGTATTTCAGCATGTTGTATTCAATGTTCAGTCCATTTCTGACTCAAAGAACCAAGAGCAAGTTTGTGATTTCTAAGGAAGGAAATGCTGCAGAAACACTCTACAAATTTATAAGGCCTGAGAATATTCCTGTTCAATATGGAGGACTGAGTAGACCTAGTGATTTTCAAAATGGTCCCCCAAAACCAGCTTCTGAGTTCACTGTTAAAGGAGGAGAAAAAGTTAACATACAAATAGAAGGAATTGAGAGTGGTGCAACAATCAAGTGGGAGATTGTAGTTGGAGGCTGGGATTTGGAATACAGTGCTGAATTTGTCCCAAATGCAGAAGCTAGCTACACTATAGAAGTTGAAAAGGCAAGGAAAGTTAATGCATCAGAAGAAGCAATTCAGAATTCATTCACATCAAAAGAAGCAGGCATAATGGTACTCTCAGTTGATAACTCTGCTTCTAGGAAGAAAAAAGTTGCTGCTTATCGCTATCTTGTTCGCAAATACACACCTTCTGATATGCAATTAAGCCTCAAATAG 1344 0.3839 MQKFHLGLSQIPHSPSMEEDSSSSMSILSTPFLETPKKSTPKPNKRTIVTTLMEAATFTSSSFKEDTYYISNLKSSEKKALQELKKKLLASDEINNNNGSMWGVCLINGDEVADVLLLKFLRARDFRVNDAFTMLVKCLSWRKEFGAENVVDEDLGFKELEGVVAFTHGFDREGHPVCYNHYGVFKDKNMYERIFGDEEKLKKFLRWRVQVLERGIKLLQFKPGGVNSLIQVTDLKDMPKSELRAVSNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNAAETLYKFIRPENIPVQYGGLSRPSDFQNGPPKPASEFTVKGGEKVNIQIEGIESGATIKWEIVVGGWDLEYSAEFVPNAEASYTIEVEKARKVNASEEAIQNSFTSKEAGIMVLSVDNSASRKKKVAAYRYLVRKYTPSDMQLSLK* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2366 447 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 337 439 IPR036598 -
Mal3g2366 447 MobiDBLite consensus disorder prediction 1 25 - -
Mal3g2366 447 SMART CRAL_TRIO_N_2 113 138 IPR011074 -
Mal3g2366 447 PRINTS Cellular retinaldehyde-binding protein signature 278 297 - -
Mal3g2366 447 PRINTS Cellular retinaldehyde-binding protein signature 116 138 - -
Mal3g2366 447 PRINTS Cellular retinaldehyde-binding protein signature 245 266 - -
Mal3g2366 447 SMART sec14_4 159 323 IPR001251 -
Mal3g2366 447 SUPERFAMILY CRAL/TRIO domain 158 323 IPR036865 -
Mal3g2366 447 Gene3D - 52 145 - -
Mal3g2366 447 PANTHER PATELLIN-1 34 438 IPR044834 GO:0008289
Mal3g2366 447 Gene3D - 154 332 IPR036865 -
Mal3g2366 447 Gene3D GOLD domain 333 433 - -
Mal3g2366 447 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 153 326 IPR001251 -
Mal3g2366 447 Pfam CRAL/TRIO domain 161 320 IPR001251 -
Mal3g2366 447 Pfam CRAL/TRIO, N-terminal domain 81 137 IPR011074 -
Mal3g2366 447 SUPERFAMILY CRAL/TRIO N-terminal domain 67 153 IPR036273 -
Mal3g2366 447 CDD SEC14 157 321 IPR001251 -
Mal3g2366 447 ProSiteProfiles GOLD domain profile. 302 436 IPR009038 -
Mal3g2366 447 PANTHER PATELLIN-6 34 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2366 Mal-Chr3 93752721 93755381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2366 117 315 Acyl Lipid Metabolism Gene Families AT1G55840 25.581 5.93e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2366 - - cam:101508309 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2366 3 93752721 93755381 Mal3g2366 3 93752721 93755381 ECH
Mal3g2366 3 93752721 93755381 Mal7g0224 7 5263179 5266078 PCT