Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0995 ATGGGAGTGACACCCAAAATTGCTCCTTCGATGCTATCATCTGACTTCGCAAATTTAGCATCCGAAGCTCATCGTATGATCAACTACGGCGCTGATTGGCTTCACATGGACATCATGGATGGGCACTTTGTCCCTAATTTAACTATGGGCGCTCCAATCATTGAAAGTTTGAGAAAGCACACAAAGGCATATCTGGACTGTCACCTGATGGTTACAAATCCTCTTGATTATGTTGAACCTTTGGGAAAAGCTGGTGCTTCTGGTTTTACATTTCATATAGAGACATCAAAAGACAACTGGAAAGAACTTATCCAAAATATTAAGTCACACGGCATGAGGCCTGGTGTATCAATAAAGCCTGGGACATCTGTTGAAGAGGTTTATCCTCTGGTTGAAGCTGAAAATCCTGTCGAAATGGTTCTTGTCATGACTGTAGAACCAGGATTTGGAGGACAAAAATTTATGCCAGAGATGATGGACAAGGTACGGACACTGAGAAAGAAGTATCCATCACTTGACATAGAGGTTGATGGTGGTTTAGGGCCTTCAACCATAGATGTGGCTGCATCAGCGGGAGCGAATTGCATTGTTGCTGGAAGTTCAGTGTTTGGAGCCCCTGAGCCAGCTCATGTAATATCCTTACTGAGGAGTTCTGTTGAGAAATCACTGTAA 672 0.433 MGVTPKIAPSMLSSDFANLASEAHRMINYGADWLHMDIMDGHFVPNLTMGAPIIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHIETSKDNWKELIQNIKSHGMRPGVSIKPGTSVEEVYPLVEAENPVEMVLVMTVEPGFGGQKFMPEMMDKVRTLRKKYPSLDIEVDGGLGPSTIDVAASAGANCIVAGSSVFGAPEPAHVISLLRSSVEKSL* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0995 223 PIRSF RPE 1 223 IPR026019 GO:0004750|GO:0006098
Mal3g0995 223 Pfam Ribulose-phosphate 3 epimerase family 6 203 IPR000056 GO:0005975|GO:0016857
Mal3g0995 223 PANTHER RIBULOSE-PHOSPHATE 3-EPIMERASE 1 221 - -
Mal3g0995 223 ProSitePatterns Ribulose-phosphate 3-epimerase family signature 2. 140 162 IPR000056 GO:0005975|GO:0016857
Mal3g0995 223 Gene3D Aldolase class I 1 223 IPR013785 -
Mal3g0995 223 ProSitePatterns Ribulose-phosphate 3-epimerase family signature 1. 34 48 IPR000056 GO:0005975|GO:0016857
Mal3g0995 223 SUPERFAMILY Ribulose-phoshate binding barrel 5 220 IPR011060 -
Mal3g0995 223 Hamap Ribulose-phosphate 3-epimerase [rpe]. 4 218 IPR026019 GO:0004750|GO:0006098
Mal3g0995 223 CDD RPE 6 216 IPR000056 GO:0005975|GO:0016857
Mal3g0995 223 TIGRFAM rpe: ribulose-phosphate 3-epimerase 6 216 IPR026019 GO:0004750|GO:0006098
Mal3g0995 223 PANTHER RIBULOSE-5-PHOSPHATE-3-EPIMERASE 1 221 IPR000056 GO:0005975|GO:0016857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0995 Mal-Chr3 40749095 40754288 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0995 K01783 - gmx:100500085 414.075