Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0980 ATGGTTTTTCTAGGCTTAATGCAGTTCTCTGTTTTATCACTCTGTTTCTTAGTCTTAACAACTTTTCCTATTCAAGCTTCAAGCCGTAGCTCCTTTGGAAGAACACAAAATGGTGTTAACCCTCAAATGGATGATGGAATATGTGCAGCTTCTGTCATTGTTCATGGATACAAATGTCAAGAACTTCAGGTTACAACTAAAGATGGGTACATTTTGAGCCTGCAAAGGATCCCAGAAGGTAGAGGTGAAGTTAGAAATGGTGGGACTAGGAAACAACCGGTGATATTACAACATGGAGTATTGGTGGATGGGATGACATGGCTTATGAACCCTCCAGAACAAGACTTGCCTCTAATTTTAGCAGATAATGGCTTTGATGTTTGGATTGCTAACACCAGAGGAACCAGACATAGTCGCCGACATGTCTCATTGGACCCCTCTAACCCGGCTTTTTGGAATTGGTCTTGGGACGAACTTGTTACCTATGATCTACCTGCTGTTTTTGATTATGTGTTCAGCCAAACAGGACAGAAGATTAATTACGTTGGTCACTCTCTGGGGACTTTGATAGCTTTAGCTTCCTTTTCTGAAGGAAAATTGATTAACCAGCTGAAATCAGCAGCTTTATTGAGCCCTATTGCTTATTTGAGCCACATGAACACTGCACTTGGTGTTGTTGCAGCCAAATCCTTTATTGGTGAGATCACTACACTATTTGGTCTAGCAGAATTTAATCCTAAAGGTTTACCTGTTGATGCCTTTCTCAAGTCTCTGTGTGCTGACCCTAGAATTGATTGCTACGACTTGATGACTGCATTAACCGGTAAAAATTGTTGTCTCAATTCTTCAACTGTTGAACGATTCTTGATGAATGAACCTCAATCAACATCAACAAAGAACATGGTGCACTTGGCCCAAATTGTTAGACGTGGGGTTCTAGCAAAATTCAATTATGTAAGACCAGATTACAACATTATGCATTATGGAGAAATATTCCCACCAATATATAACCTCTCCAATATTCCACATGATCTCCCTCTCTTCATTAGCTATGGAGGACAAGATGCACTTTCTGATGTTCGTGACGTTGAGAATTTACTTGATAGGCTTAAGTTCCATGATGTGGATAGGAGAAGTATTCAATTTGTCAAAGACTATGCTCATGCTGATTACATTATGGGGTTCAATGCTAAAGACATAGTGTATAATTCTGTTCTTTCATTTTTCAATGGTCAAGTCAACACTTGA 1248 0.395 MVFLGLMQFSVLSLCFLVLTTFPIQASSRSSFGRTQNGVNPQMDDGICAASVIVHGYKCQELQVTTKDGYILSLQRIPEGRGEVRNGGTRKQPVILQHGVLVDGMTWLMNPPEQDLPLILADNGFDVWIANTRGTRHSRRHVSLDPSNPAFWNWSWDELVTYDLPAVFDYVFSQTGQKINYVGHSLGTLIALASFSEGKLINQLKSAALLSPIAYLSHMNTALGVVAAKSFIGEITTLFGLAEFNPKGLPVDAFLKSLCADPRIDCYDLMTALTGKNCCLNSSTVERFLMNEPQSTSTKNMVHLAQIVRRGVLAKFNYVRPDYNIMHYGEIFPPIYNLSNIPHDLPLFISYGGQDALSDVRDVENLLDRLKFHDVDRRSIQFVKDYAHADYIMGFNAKDIVYNSVLSFFNGQVNT* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0980 415 SUPERFAMILY alpha/beta-Hydrolases 55 410 IPR029058 -
Mal3g0980 415 PIRSF Steryl_ester_lip 6 414 IPR025483 GO:0016788
Mal3g0980 415 PANTHER TRIACYLGLYCEROL LIPASE 2 11 411 - -
Mal3g0980 415 Pfam Partial alpha/beta-hydrolase lipase region 54 110 IPR006693 GO:0006629
Mal3g0980 415 Gene3D alpha/beta hydrolase 41 411 IPR029058 -
Mal3g0980 415 PANTHER LYSOSOMAL ACID LIPASE-RELATED 11 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0980 Mal-Chr3 40114880 40122592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0980 45 415 Acyl Lipid Metabolism Gene Families AT2G15230 38.005 1.20e-94 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0980 K01052 - gmx:100779460 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g0980 3 40114880 40122592 Mal6g4186 6 120556601 120559214 PCT