Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0969 ATGGCTCTATCAACCTCCTTCTCCAACTTCTTCCCATTCCTCTCACCACCGTCAAAGTCCCAACAACCACCATCTCAACTCCCACTTCTCTCTCCATTTCCATCTCACCAAAACCGCAACAACAAGTTCATACCACTCGTTCTCACCCGCAACAATGAAAACTCTTCATCTTCTGTCACATCATCATCATTTTCAGCAGCACCACCACAAGACATGTCTTCAAGGGTCACTTCATCACTATCAACTTCAAACACCATGGTCTTTGCTTCAACTTATAATGTTGAAATTTTTGTTGAAGAGGATGAGCATGAAGAGAGGATGCTTAATAGGTTTCGTAGAGAGGTTATGAGAGCTGGTATTATTCAAGAGTGTAAGAGAAGAAGGTTTTTTGAGAATACACAGGATGAGAAGAAACGTAGGGTTCGTGATGCTGCTAAGCGTAATCGTTGGAACAGGCGCCCTATGGCAGGGGGGAAGTCACCAGGATGGTACAACAACTACAGGCAAGATGAGCCAAAACCCAAGGAAGAGGATGACGATAACTGGGATCTACCTGAAGAGGATGTGCTAAAATTTTGA 579 0.4387 MALSTSFSNFFPFLSPPSKSQQPPSQLPLLSPFPSHQNRNNKFIPLVLTRNNENSSSSVTSSSFSAAPPQDMSSRVTSSLSTSNTMVFASTYNVEIFVEEDEHEERMLNRFRREVMRAGIIQECKRRRFFENTQDEKKRRVRDAAKRNRWNRRPMAGGKSPGWYNNYRQDEPKPKEEDDDNWDLPEEDVLKF* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0969 192 MobiDBLite consensus disorder prediction 55 80 - -
Mal3g0969 192 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21 1 189 IPR001911 GO:0003735|GO:0005840|GO:0006412
Mal3g0969 192 MobiDBLite consensus disorder prediction 15 36 - -
Mal3g0969 192 MobiDBLite consensus disorder prediction 136 192 - -
Mal3g0969 192 PANTHER PROTEIN S21 FAMILY PROTEIN, PUTATIVE-RELATED 1 189 - -
Mal3g0969 192 TIGRFAM S21p: ribosomal protein bS21 95 148 IPR001911 GO:0003735|GO:0005840|GO:0006412
Mal3g0969 192 Gene3D Ribosomal protein S8 108 146 IPR038380 -
Mal3g0969 192 Hamap 30S ribosomal protein S21 [rpsU]. 93 149 IPR001911 GO:0003735|GO:0005840|GO:0006412
Mal3g0969 192 Pfam Ribosomal protein S21 96 149 IPR001911 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0969 Mal-Chr3 39869885 39872169 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0969 - - mtr:MTR_7g029325 202.216