Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0883 ATGGATAGCAAAAACGTCGTCGTTTGCGACAACGGAACCGGATATGTGAAATGTGGTTTTGCTGGGGAGAATTTCCCTACTTCCGTTTTTCCTTGTGTTGTTGGGAGGCCGATGCTCCGTTACGAAGAATCGCTTACCGAGCAAGAGCTAAAGGATATTGTTGTTGGCGAAGGATGTGCAGACCTGCGGCATCAGCTTGATATATCTTATCCTGTGAACAATGGAATCGTTCAAAATTGGGATGACATGTGTCATGTGTGGGATCATGCATTTTACAATGAATTAAAAATTAACCCTCAAGACTGTAAGATTCTACTCACAGATCCGCCTCTTAATCCCTCAAAGAATCGCGAAAAAATGGTTGAGACAATGTTTGAGAAGTACAATTTTGCTGGAGTGTTTATCCAAATCCAAGCTGTTCTAACATTATATGCTCAAGGTTTGCTGACTGGATTAGTTATAGACTCGGGTGATGGTGTCACTCATGTGGTTCCGGTTGTTGATGGCTATTCATTCCCTCATCTGACGAAGCGGATGAATGTAGCTGGCCGACATATAACTTCCTATCTTGTTGATTTGCTTTCAAGGAGGGGATATGCAGTGAATAGGAATGCTGATTTTGAGACTGTTAGGGAAATCAAAGAGAAGCTATGCTATATAAGCTATGACTACAAGAGGGAATATCAGTTGGGGCTTGAGACCACTATCCTTGTTAAGAACTATACTCTTCCAGATGGAAGGGTCATTAAAGTAGGCACTGAAAGATTCCAGGCCCCTGAGGCTCTTTTCACCCCGGAACTTATAGATGTTGAAGGTGATGGAATGGCTGACATGGTATTTCGATGCATTCAAGAAATGGATATTGACAACCGGATGATGCTTTATCAACACATAGTTTTAAGTGGAGGGAGCACCATGTATCCTGGATTACCAAGCCGATTGGAAAAAGAAATAAATGATCGTTATCTGGATGTTGTCTTGAAGGGCAACAAAGATGGATTGAAGAAATTACGATTGAGAATTGAGGATCCACCACGTAGGAAACACATGGTGTACCTTGGAGGTGCTGTCCTTGCAGGAATAATGAAGGATGCACCAGAGTTTTGGATTAACAGGGAAGATTATCTAGAAGAAGGAATTGCTTGCCTGAGTAGGTGCGGCCAAGCTTGA 1170 0.4239 MDSKNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPMLRYEESLTEQELKDIVVGEGCADLRHQLDISYPVNNGIVQNWDDMCHVWDHAFYNELKINPQDCKILLTDPPLNPSKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYAVNRNADFETVREIKEKLCYISYDYKREYQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEINDRYLDVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWINREDYLEEGIACLSRCGQA* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0883 389 Pfam Actin 2 383 IPR004000 -
Mal3g0883 389 SMART actin_3 4 387 IPR004000 -
Mal3g0883 389 Gene3D - 139 350 - -
Mal3g0883 389 PANTHER ACTIN-RELATED PROTEIN 2 1 385 - -
Mal3g0883 389 PANTHER ACTIN 1 385 IPR004000 -
Mal3g0883 389 CDD NBD_sugar-kinase_HSP70_actin 7 190 - -
Mal3g0883 389 SUPERFAMILY Actin-like ATPase domain 2 154 IPR043129 -
Mal3g0883 389 PRINTS Actin signature 62 84 IPR004000 -
Mal3g0883 389 PRINTS Actin signature 237 253 IPR004000 -
Mal3g0883 389 PRINTS Actin signature 25 34 IPR004000 -
Mal3g0883 389 PRINTS Actin signature 116 129 IPR004000 -
Mal3g0883 389 PRINTS Actin signature 141 160 IPR004000 -
Mal3g0883 389 Gene3D Actin; Chain A, domain 4 181 272 - -
Mal3g0883 389 SUPERFAMILY Actin-like ATPase domain 147 384 IPR043129 -
Mal3g0883 389 Gene3D - 7 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0883 Mal-Chr3 34989551 34998478 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0883 2 385 Miscellaneous Gene Families AT2G42100 44.792 2.27e-124 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0883 K17260 - gmx:100796648 789.26