Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5076 ATGTTTGGTTCAAAGAAATCTCCTTTGAAAGATGCTAAACCTAGGTCTACAAATAACCCATTTGATTCTGATGAAGAGAAAAAGGATAACAGAAAGAATAATTCTTCAAAGAAGAATTCTTCTGAATATAACCTAGTTCAGAGAGAAACTAATACCAACCCTTTTGATGATGTTGATGCTCGTGGTCACTCTTCGTCATCATCTTATGCCCCGTCATACGGCAATCGAAACATGTATAAGAACGACTTCCGTGACTCTGGTGGATTGCAGAGTCAATCGGTGGAGGATTTGGAGAACTATGCTGTTTATAAGTCTGAAGAGACGACAAAATCGGTAAACAATTGTCGGAAGATAGCAGAGGAAATGCGAGAGGATGCTACTAAGACGTTGGTTATGCTGCATCATCAGGGCGAGCAGATTACAAGGAGTCACGATATTGCTGCTGGCATTGACCATAATTTAAGTCGGGGAGAAAAACTATTAGGAAGTCTTGGTGGCATGTTCTCCAAAACATGGAAACCAAAGAAAACAGGAACAATAACAGGCCCTACAGTATTTGGAGATGATCCAGTCCGAAAAAGTGCCAACCATTTGGAGCAACGAGAGAAGTTAGGATTGAATTCTGCCCCTAAAGGACAGTCAAAGCCAAGGAAAGCACTTTCTGAGCCAGCAAATGCATTTGAAAGAGTTGAGGTTGAGAAAGAGAAGCAAGATGATGCACTTTCAGATATAAGTGATCTTTTGGGAGAACTTAAGGGCATGGCCATTGACATGGGATCCGAAATTGAGAGGCAAAACAAAGCTATAGATGGATTTGAAAAAGATACTGAGAAGTTAAATATCCGCATGAATGGTGCCAATCAACGTACTCTTCATTTACTTCGAAAATAG 891 0.404 MFGSKKSPLKDAKPRSTNNPFDSDEEKKDNRKNNSSKKNSSEYNLVQRETNTNPFDDVDARGHSSSSSYAPSYGNRNMYKNDFRDSGGLQSQSVEDLENYAVYKSEETTKSVNNCRKIAEEMREDATKTLVMLHHQGEQITRSHDIAAGIDHNLSRGEKLLGSLGGMFSKTWKPKKTGTITGPTVFGDDPVRKSANHLEQREKLGLNSAPKGQSKPRKALSEPANAFERVEVEKEKQDDALSDISDLLGELKGMAIDMGSEIERQNKAIDGFEKDTEKLNIRMNGANQRTLHLLRK* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5076 296 Coils Coil 262 282 - -
Mal2g5076 296 CDD SNARE_Qc 234 289 - -
Mal2g5076 296 MobiDBLite consensus disorder prediction 1 89 - -
Mal2g5076 296 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 296 - -
Mal2g5076 296 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 1 296 - -
Mal2g5076 296 Gene3D - 88 166 - -
Mal2g5076 296 MobiDBLite consensus disorder prediction 8 36 - -
Mal2g5076 296 SMART tSNARE_6 97 164 IPR000727 -
Mal2g5076 296 SMART tSNARE_6 226 293 IPR000727 -
Mal2g5076 296 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 231 293 IPR000727 -
Mal2g5076 296 MobiDBLite consensus disorder prediction 203 224 - -
Mal2g5076 296 Gene3D - 219 296 - -
Mal2g5076 296 CDD SNARE_SNAP25N_23N_29N_SEC9N 99 163 IPR044766 GO:0005484|GO:0031201
Mal2g5076 296 SUPERFAMILY SNARE fusion complex 228 292 - -
Mal2g5076 296 SUPERFAMILY SNARE fusion complex 92 162 - -
Mal2g5076 296 MobiDBLite consensus disorder prediction 37 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5076 Mal-Chr2 118863049 118865349 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5076 K18211 - gmx:100806698 411.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g5076 2 118863049 118865349 Mal2g5076 2 118863049 118865349 ECH