Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5068 ATGGCGAGCGATGACAATCTAAAGACATGGGTTTCAGATAAGTTGATGTCACTACTAGGATATTCTCAGCCCACAGTTGTACAGTACATGATTGGACTATCCAAGCAAGCTACTTCACCAGCCGATTTAGTGGGAAAACTAGTGGAGTTTGGGTTTTCAACAACGGACACCCGTGCGTTTGCGGAAGAAATTTTCTCAAGAGTTCCTCGTAGATCGTCCGGCTTAAATCAATATCAAAAACAAGAGAGAGAAGCTGCAATGTTGGCAAGGAAGCAGGGGACTTACACAATTTTGAAGGACGATGACGATATCGACGATGACCATACTGTTGGTGGTGACGATAAATCATCGATAACTACTGCTTCTACATCTAGAAAATCAGACTGTCATAAAAAACGTTTCAGGAAGAAAACTGAAGTTCAAGATGATCAAGAAGATGAGGTAATTTCAAGGAAAGAAAGAGAAAGACAAGTTAAAAGAAGAACTTCCCCTGCTGAAGAGAGTGGGTCAGAGTCAGAAGAGGAAAGATTGAAAGATCAAAGAGAAAAGGAGGAATTAGTGCAGCATATGAGAGAAAGAGATGCTGCAGCAACACGGAAGTTGAATGAACAAAAATTAACACGAAAGGAGGAAGAAGAAGCAATTCGAAGATCTAATGCTGCAGAGCAGGATGATTTGCGTAGTTTGAGAAAGTATTCACGGCAAGAATACTTGAAGAAAAGAGAGGAAAAGAAATTAGAAGAACTGAGAGATGATATAGAAGATGAGCAATATCTATTTGAAGGTGTGAAGCTTTCAGAAGTGGAACAGCGTGAGTTAAGGCACAAGAAAGAGCTATATGAACTTATAAAAAAGCGGTCAGACGAGGCGGACAATGTGAATGAGTATAGAATGCCAGACGCTTATGATCAGGAAGGCGGCGTTAATCAAGAAAAGAGATTTTCTGTGGCTATGCAGCGTTACAGGGATACAAATGCTGAGGAAAAGATGAATCCATTTGCTGAACAAGAGGCATGGGAGCAACATCAAATTGGAAAGGCAACACTGAAGTATGGCTCAAAAAATAAAAAACAAGACTCTGAAGATTACCAGTTTGTGTTTGAGGACCAAATTGATTTTATCAAGGCATCGGTGATGGATGGAGATAAGTTTGATTACGATGAGATGGCAGATTCAATTGAAAAGTCCAAAGCAAAGTCTGCAGCAGAGGCACTTCAGGAGGAGAGAAAAAAATTACCCATTTATACTTATCGGGATGAATTGCTCCAAGCTGTTCATGACCACCAGGTACTTGTAATTGTGGGTGAAACCGGTTCTGGAAAGACTACACAAATTCCTCAATATCTTCATGAAGCTGGCTACACAAAACATGGAATGATTGCATGTACTCAGCCACGTCGTGTTGCTGCTATGAGTGTGGCTGCTCGAGTTGCTCACGAATTAGGTGTTAAACTAGGACACGAGGTTGGGTACTCCATCCGTTTTGAGGATTGCACATCAGACAAGACTATTCTGAAATATATGACAGATGGAATGTTACTGAGGGAATTTCTTGGTGAGCCTGATCTGGCAAGTTATAGTGTTGTGATGGTGGATGAGGCTCATGAAAGAACACTCTCAACTGATATTTTGTTTGCGTTGGTAAAGGATATTTCTCGCTTCCGACCTGATCTAAAGTTGCTGATATCAAGTGCTACACTTGATGCAGAAAAGTTCAGTGATTACTTTGATTCTGCTCCAATATTCAAAATTCCAGGGAGAAGGTATCCAGTTGAAATACACTTTACCAAAGCACCAGAAGCTGACTACTTAGATGCAGCTATTGTCACGGCACTTCAAATCCATGTTACTCAATCTCCTGGAGATATATTGATATTCCTTACTGGTCAAGAAGAAATTGAAACGGCTGAAGAAATCTTGAAGCATCGAACTAGAGGCTTAGGGACAAAAATTGCCGAACTAATTATATGTCCTATATATGCTAACCTACCAACTGAACTACAAGCTAAAATATTTGAACCAACTCCTGAAGGGGCACGAAAGGTTGTCCTTGCTACCAATATTGCAGAAACATCATTGACAATTGATGGAATAAAGTATGTCATTGATCCAGGATTCGTTAAGATGAAAAGTTATAATCCAAAGACAGGAATGGAGTCTTTACTAGTGTCTCCCATCTCAAAAGCCTCAGCAATGCAACGAGCTGGTCGATCTGGAAGAACAGGTCCTGGAAAGTGCTTCCGATTGTATACTGCATACAATTTTCAAAATGATTTGGATGATAACACTGTACCCGAAATACAGAGGACTAACCTCGCAAATGTAGTTTTGACTTTAAAAAGTCTTGGTATTCATGACTTGTTGCACTTTGAATTTATGGATCCTCCGCCTGCTGAGGCCTTATTGAAAGCCCTGGAGCTTCTATTTGCTTTAAGTGCTTTAAATAAGCTTGGTGAGTTAACTAAGGTAGGTAGACGGATGGCAGAGTTCCCAGTTGATCCTATGTTGTCAAAGATGATAGTGGTTTCAGAAAAATACAAATGTTCAGAAGACATCATTTCCATTGCTGCTATGCTTTCTATTGGAAACTCAATATTTTACCGTCCAAAGGATAAACAAGTGCATGCAGACAATGCAAGGCTGAATTTTCACACTGGAAATGTTGGAGACCATATTGCATTGCTAAAGGTCTACAATTCTTGGAAGGAGACCAATTATTCAACACAATGGTGTTATGAAAATTATATACAGGTGAGGAGTATGAAACGGGCGAGGGATATCCGTGATCAACTTGCAGGTCTATTAGAGAGGGTTGAGATTGAGCTTACTACAAATAGTAACGATTTAGATGCCATCAAGAAATCTATAACATCTGGGTTTTTCCCACACTCTGCAAAATTGCAAAAGAACGGATCATATCGGACACTTAAACATGGGCAGACTGTTCACATACATCCTAGTTCGGGATTGGCACAGGTTCTCCCAAGATGGGTTGTGTACCATGAATTAGTACTGACAACCAAGGAATATATGAGACAGATCACGGATTTAAAGCCAGAGTGGTTGTTGGAGATTGCCCCTCACTATTACCAGCTCAAGGATGTTGAAGACATTAGTTCAAAGAAAATGCCCCGTGGAGAAGGACGCGCATAG 3153 0.4041 MASDDNLKTWVSDKLMSLLGYSQPTVVQYMIGLSKQATSPADLVGKLVEFGFSTTDTRAFAEEIFSRVPRRSSGLNQYQKQEREAAMLARKQGTYTILKDDDDIDDDHTVGGDDKSSITTASTSRKSDCHKKRFRKKTEVQDDQEDEVISRKERERQVKRRTSPAEESGSESEEERLKDQREKEELVQHMRERDAAATRKLNEQKLTRKEEEEAIRRSNAAEQDDLRSLRKYSRQEYLKKREEKKLEELRDDIEDEQYLFEGVKLSEVEQRELRHKKELYELIKKRSDEADNVNEYRMPDAYDQEGGVNQEKRFSVAMQRYRDTNAEEKMNPFAEQEAWEQHQIGKATLKYGSKNKKQDSEDYQFVFEDQIDFIKASVMDGDKFDYDEMADSIEKSKAKSAAEALQEERKKLPIYTYRDELLQAVHDHQVLVIVGETGSGKTTQIPQYLHEAGYTKHGMIACTQPRRVAAMSVAARVAHELGVKLGHEVGYSIRFEDCTSDKTILKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDILFALVKDISRFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIHFTKAPEADYLDAAIVTALQIHVTQSPGDILIFLTGQEEIETAEEILKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFVKMKSYNPKTGMESLLVSPISKASAMQRAGRSGRTGPGKCFRLYTAYNFQNDLDDNTVPEIQRTNLANVVLTLKSLGIHDLLHFEFMDPPPAEALLKALELLFALSALNKLGELTKVGRRMAEFPVDPMLSKMIVVSEKYKCSEDIISIAAMLSIGNSIFYRPKDKQVHADNARLNFHTGNVGDHIALLKVYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLAGLLERVEIELTTNSNDLDAIKKSITSGFFPHSAKLQKNGSYRTLKHGQTVHIHPSSGLAQVLPRWVVYHELVLTTKEYMRQITDLKPEWLLEIAPHYYQLKDVEDISSKKMPRGEGRA* 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5068 1050 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 527 536 IPR002464 -
Mal2g5068 1050 PANTHER ATP-DEPENDENT RNA HELICASE 108 1048 - -
Mal2g5068 1050 Gene3D - 588 763 IPR027417 -
Mal2g5068 1050 CDD SF2_C_RHA 589 750 - -
Mal2g5068 1050 Gene3D - 786 945 - -
Mal2g5068 1050 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 422 585 IPR014001 -
Mal2g5068 1050 MobiDBLite consensus disorder prediction 99 113 - -
Mal2g5068 1050 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 407 936 IPR027417 -
Mal2g5068 1050 SMART ha2_5 803 895 IPR007502 GO:0004386
Mal2g5068 1050 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 952 1029 IPR011709 -
Mal2g5068 1050 Pfam Helicase conserved C-terminal domain 614 742 IPR001650 -
Mal2g5068 1050 Coils Coil 201 221 - -
Mal2g5068 1050 Gene3D - 373 587 IPR027417 -
Mal2g5068 1050 SMART ultradead3 410 594 IPR014001 -
Mal2g5068 1050 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 608 783 IPR001650 -
Mal2g5068 1050 SMART helicmild6 634 742 IPR001650 -
Mal2g5068 1050 MobiDBLite consensus disorder prediction 134 227 - -
Mal2g5068 1050 Coils Coil 921 941 - -
Mal2g5068 1050 PANTHER OS05G0389800 PROTEIN 108 1048 - -
Mal2g5068 1050 Coils Coil 232 259 - -
Mal2g5068 1050 Pfam Helicase associated domain (HA2) 804 878 IPR007502 GO:0004386
Mal2g5068 1050 MobiDBLite consensus disorder prediction 99 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5068 Mal-Chr2 118604040 118630144 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5068 K12813 - gmx:100809559 1812.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g5068 2 118604040 118630144 Mal2g5068 2 118604040 118630144 ECH