Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4766 ATGTTTCATCACATGTGTCTCAAATTTCTCATCATACACCTTCTATTAATTCCAACAACAGCTTATAACCAACCCTTTGAAGATGGTTTCATCTCTGGTGTTATATCTAACAAGGGACTTGATTTTGCTAAGGATTTGTTGATAGAGAAAGGTATTGAAACTATTGTTCTTCTTAAGCTTCCTGTGATTGAGAATACTGCACAGGTTCCACTTGTTGGAAATGCTAAGGTGATTCTGTCTGATATTACAATTAAGGATGTTCAAGTTAATTCTTCCAATGTTATGATTGGAGAGAGTGGTATTGTTGTTGTTGTTTCTGGTGCTACTGCTGATTTGAGTATGAAGTGGAAGTATAGTGTGAGTTCTTGGTTGATTCCTATTGGGATTTCTGATAGTGGGACTGCTTCAATTAAGGTTACAGGCATGCAAGTGGGGCTTACATTAAATTTAAAGAACAAAGAAGGAACTCTTAAGTTGAGTCTTTTAGATCATGGATGCTATGTGGGAGATTTATCCATAAAGTTGGATGGTGGAGCAGCTTGGCTTTACCAATTACTAATAGATGTTTTTCAAGAGAATATAGCATCTTCAGTAGAAGAAGCCATTTCAGAGAAAATAACAGAAGGGATAGAAAAGCTTGATAACTTTTTGCAAGCTCTTCCAAAGCAAATCTCACTAGACAAAACTGTAGCAGTAAATGTTTCTTTTGTTGGCAATCCTGTGGTTAGTAATTCCTCAATTGCAATTGCAATTAACGGTTTATTCACAAGGACAAATGAAATTTTTGTACCTCAAAGTTACAAGAAAGGATTCGAGGTTTCTTCTGCCTGTGGTGGTTTACCAAAGATGATAAAGGTTACAATACATGAAAATGTGTTAAAATCTGCTTCCCTAGTTTACTTCAATGCAGGTAAAATGCAATTGATTATCGATGAACTACCCGATCAGGCCCTTCTGAACACCGCTGAATGGAGATTCATAGTTCCTCAATTATACAAGCGATATCCAAACAAAGACATGCAGATTAATATCTCTGCATCATCTCCACCAGTGATACAAGTGACATACCAAGATATTGGTGCTACTGTTTCTGTAGATATAACAATTGATGTTCTAGAAGGTGGTGAAGTCATACCTGTTGCATGCATCTCAGTGGATGTTAGTGCTTCATGTGCTGTGGAAATTTTAGGAAACAATCTTGCTGGTAGCCTTAGATTACAACAATTTTCTGCATACTTGAAATGGAGCAAAATAGGAAAACTGCGCATACGTCTTATTCAGATATGGATCTATCTCCGCTACTGCTAA 1308 0.367 MFHHMCLKFLIIHLLLIPTTAYNQPFEDGFISGVISNKGLDFAKDLLIEKGIETIVLLKLPVIENTAQVPLVGNAKVILSDITIKDVQVNSSNVMIGESGIVVVVSGATADLSMKWKYSVSSWLIPIGISDSGTASIKVTGMQVGLTLNLKNKEGTLKLSLLDHGCYVGDLSIKLDGGAAWLYQLLIDVFQENIASSVEEAISEKITEGIEKLDNFLQALPKQISLDKTVAVNVSFVGNPVVSNSSIAIAINGLFTRTNEIFVPQSYKKGFEVSSACGGLPKMIKVTIHENVLKSASLVYFNAGKMQLIIDELPDQALLNTAEWRFIVPQLYKRYPNKDMQINISASSPPVIQVTYQDIGATVSVDITIDVLEGGEVIPVACISVDVSASCAVEILGNNLAGSLRLQQFSAYLKWSKIGKLRIRLIQIWIYLRYC* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4766 435 Pfam LBP / BPI / CETP family, N-terminal domain 39 213 IPR017942 GO:0008289
Mal2g4766 435 SMART bpi1_3 35 260 IPR017942 GO:0008289
Mal2g4766 435 PANTHER LBP/BPI/CETP FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 8 428 - -
Mal2g4766 435 Gene3D - 38 218 - -
Mal2g4766 435 Pfam LBP / BPI / CETP family, C-terminal domain 281 430 IPR001124 GO:0008289
Mal2g4766 435 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 35 244 IPR017943 GO:0008289
Mal2g4766 435 Gene3D - 34 428 - -
Mal2g4766 435 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 246 430 IPR017943 GO:0008289
Mal2g4766 435 SMART bpi2_2 278 434 IPR001124 GO:0008289
Mal2g4766 435 PANTHER OS06G0309200 PROTEIN 8 428 IPR045897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4766 Mal-Chr2 104739662 104745548 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4766 K05399 - gmx:100815362 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g4766 2 104739662 104745548 Mal8g0376 8 5283633 5287310 PCT