Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4269 ATGAAAGGGTTCAACACTTTGTTTCAAAGGAGTGAAAACAAATTGGTTTATGTTCCCATATCCATGTATCATACCATAGCGCAGTTACACAATAATAATAACAACCTTAAACAACCAAAACCAAACCAAACCCTTAAGAATTACCTTGAATGCAACAACCACACCAAGGTTCTTCTACTCTTCAGAACCTTGTTAAGAAAAAAATCATCCACTTTCAACTCCATTGATAGCTTTTCTTTTTTGTATACCCTTAAAGCCTGCATCAACAAGAAAAATTCATGTATCCAAGGAAAACAATTGCATACCCTCATCATAAAATTTGGATATGAATCCATAGTTCAACTCCAAACATCCCTTTTGAAAGTGTATGCTGAAGGGGGTAACTTATTTGATGCACACCAAGTGTTTGAGGAAATACCAAAAAAGAATATTATATGTTGGACATCTTTGATTTCTGCTTATGTTGAAAATCATAGACCCAACAAAGGTTTGGAATTGTTTAGGCTGATGCTGATGAACAATGTGGAGCCCGATCAAATTGTTTTGACGACTGCTCTCTCGGCATGTGCTGATACTGGGGGACTCGAAATGGGTGAATGGATTTATGATTTCGTTCGACGTAAACACGGGATTAAGATAGATTTGTGTTTGAATAATGCTCTCATAAATATGTATGCTAAATGTGGCGATATTGTAAATGCAAGGAAGTTGTTTGATTGCACAAGAAACAAAGATGTCACAACTTGGACTTCTATGATTGTTGGGCATGCACTACATGGCCAAGCTCGTGAAGCTATTCAACTTTTCTCAGAAATTAATACAAGGAATGACAAGGAAAATTGGAGTTCTTCTAACTTTGTTGTATTTCCGAACGATGTAACGTTCATTGGAGTTTTAATGGCTTGCAGCCATGCGGGGTTGGTCGAAGAAGGGAAACGACATTTCAGAAGTATGACCGAAGATTATGGTATACAACCAAGAGAACCTCACTATGGCTGCATGGTGGATCTCTTATGTAGAAGCGGGCATCTGAGCGAGGCATATGACTTCATTATGGAGATGCCGGTGCCTCCGAATGCGGTAATTTGGCGAACGTTGCTTGGGGCATGTAGTCTCCATGGTGATTTAGAGCTAGCTACACAAGTTCGACATAAATTGCTCAACTTGGACCCTGGCTATGTTGGTGATAGTGTTGCTATGTCGAATATTTATGCGGAGAAAGACATGTGGAATAAAAAGATTATTGTTAGGAATCAGATTAAACAGTCAAGAGCTCCTGGCTTAAGCTCAATTGAGGTGGGAAGTTAG 1308 0.3891 MKGFNTLFQRSENKLVYVPISMYHTIAQLHNNNNNLKQPKPNQTLKNYLECNNHTKVLLLFRTLLRKKSSTFNSIDSFSFLYTLKACINKKNSCIQGKQLHTLIIKFGYESIVQLQTSLLKVYAEGGNLFDAHQVFEEIPKKNIICWTSLISAYVENHRPNKGLELFRLMLMNNVEPDQIVLTTALSACADTGGLEMGEWIYDFVRRKHGIKIDLCLNNALINMYAKCGDIVNARKLFDCTRNKDVTTWTSMIVGHALHGQAREAIQLFSEINTRNDKENWSSSNFVVFPNDVTFIGVLMACSHAGLVEEGKRHFRSMTEDYGIQPREPHYGCMVDLLCRSGHLSEAYDFIMEMPVPPNAVIWRTLLGACSLHGDLELATQVRHKLLNLDPGYVGDSVAMSNIYAEKDMWNKKIIVRNQIKQSRAPGLSSIEVGS* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4269 435 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 245 279 IPR002885 -
Mal2g4269 435 PANTHER PENTATRICOPEPTIDE REPEAT PROTEIN-RELATED 28 171 - -
Mal2g4269 435 Gene3D Tetratricopeptide repeat domain 210 285 IPR011990 GO:0005515
Mal2g4269 435 Gene3D Tetratricopeptide repeat domain 39 209 IPR011990 GO:0005515
Mal2g4269 435 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 143 177 IPR002885 -
Mal2g4269 435 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 28 171 - -
Mal2g4269 435 Pfam PPR repeat 331 354 IPR002885 -
Mal2g4269 435 Pfam PPR repeat 146 174 IPR002885 -
Mal2g4269 435 Pfam PPR repeat 117 144 IPR002885 -
Mal2g4269 435 Pfam PPR repeat 293 320 IPR002885 -
Mal2g4269 435 Pfam PPR repeat 219 240 IPR002885 -
Mal2g4269 435 Pfam PPR repeat 248 273 IPR002885 -
Mal2g4269 435 Gene3D Tetratricopeptide repeat domain 286 426 IPR011990 GO:0005515
Mal2g4269 435 PANTHER PENTATRICOPEPTIDE REPEAT PROTEIN-RELATED 113 433 - -
Mal2g4269 435 TIGRFAM PPR: pentatricopeptide repeat domain 145 178 IPR002885 -
Mal2g4269 435 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 113 433 - -
Mal2g4269 435 SUPERFAMILY TPR-like 90 250 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4269 Mal-Chr2 80545006 80546313 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4269 51 434 Glycoside Hydrolase AT3G49170 34.109 2.28e-69 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4269 - - lang:109327537 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g4269 2 80545006 80546313 Mal2g4269 2 80545006 80546313 ECH