Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4177 ATGCAGAATATGTTACGGTCAAAGCCGATCAGTACCTTTTCTAGCAGTGCTAGGAGCTTTTTCTTTGGTGGTACACGATGTAATGCACCAGATGCTAATTCGTGCACGTGCAACGAGGACGAAACATGTGCCTCAGTAAGACAACAGAGGAAGAAGAATCAAGATTTACTTGCGCAGAAGCCAACCTCTATAGTAGCCAAAGCTACATCTCAAGTAGATGGAGCCTCGGTTTCAAGAAACCCGGCAAGTGGAACAGCTTCTCAAAAGATTGAGGGTGTTGATCAATCTGGCAGTGTACAACAAGTCAGGTCTACTTCAGGTCCTTCAAGTAAATCAAACTCTGTATCATATGCTTGTGTGGCTGATGATAGTCAGAATCATGTTACACAGTCTTCACCTCTTGAAGGTGACCAGATTTATAGGGCTGGTATTGCAGCTGTGAATTTCATTTCTGATTTAGTTAATAGTAATCTTCCTTTATCAGATGGGATGGGAATACTGAGCTACTCTAAAAATTGTATGGTTGAACCTGCCTCTGCCATAGCCAATATCAGATCTTCCAATGTGAAAAAAATTAGAAAGGAGGACTTTGTTAGTGTTCATCCCAGACCACCTGTTTCTACTCAACCAGGTCCATCAAACAATACAAGTAGTTATCATGGTTCAAATGGGAGGGGTGATAAGTCAAAGATAGCTAAAGGCTTTCAGCATGTTGCTTCTTCAGGGACGGGGAAGTCGGAGGTGGCTCCCCATATTCCTTTTAATACTCATGATAGCAGACCCTTGCCACCGAGGACAAGAACTCATTCAAATCGATTTGTCGCTAAATTTGGTAACAAAATGCAAACTTCAAACTCACAGATGTTGGGGTCGTTCAAGGAAAGCTTCAATAGATACCCCAGGGATCTGAAAACATCAGCAGAAGTTGCTTCATCAAAAACACATTATGCGAAGACAGGTCGCCGCGATGTGGAAGTTGTTAAAGACATATTGCAACAGTTAAAGTGGGGTCCTGCTACAGAAGAGGCTCTTTATAATCTGAATTTTTTTATAGATGCATATCAGGGCAACCAAGTCCTAAAGCAACTTGAAGACCATTCGGTTGCTCTAAACTTCTTTTACTGGTTAAAGCGACAATCGGGCTTCCGGCATGATGGGCATACTTACACCACTATGGTTGGTATCTTGGGGCGTGCAAGAGAGTTTGGTGCAATAAACAAATTGCTAGAACAGATGGTCAATGATGGGTGTCAGCCTAATGTTGTAACATATAATCGCCTAATTCATAGCTATGGCCGTGCAAACTACCTAAAGGAAGCACTGAATGTCTTCAATCAAATGCAGGAGAAGCAATGTGAGCCTGATCGTGTCACTTACTGCACGCTCATCGATATCCATGCAAAAGCTGGATATCTTGATGTGGCCATGTCCATGTATGAAAGAATGCAACAAGTTGGCCTATCTCCTGACACATTTACTTACAGTGTGATGATTAACTGTTTGGGAAAATCTGGTAATTTAGCTGCTGCTGACAGACTATTTTGTGAGATGGTTGATCAGGGTTGTGTTCCTAATATTGTCACCTACAATATCATGATTGCTTTGCAAGCTAAAGCAAGGAATTATGAAACAGCATTGAAACTATATCGTGACATGCAGAATGCAGGATTTAAACCTGACAAAGTTACATATAGCATTGTAATGGAGGTGCTTGGTCACTGTGGGTATCTGGAGGAAGCAGAAGCAGTCTTTGTTGAGATGAAGCAGAGGAATTGGATTCCGGATGAACCTGTTTATGGTCTTCTGGTAGACCTATGGGGAAAGGCTGGTAATGTTGAGAAGGCTTGGGAATGGTACGGGGCAATGCTCAGTGCAGGTTTGCTTCCAAATGTACCAACTTGCAATTCTCTTCTCAGTGCATTTCTTAGGGTGCATCGATTGCCAGATGCGTATAATCTTCTCCAAAGCATGGTAGCACTCGGCCTAAGCCCTTCTTTGCAGACTTATACTTTGCTTCTCAGCTGTTGTACAGAGGCACAATCACAGTACGATATGGGATTTTGCTGTGAGCTGATGAAAGTCACTGGCCATCCTGCTCATGTATTTTTACAGTCAATGCCGGCAGCAGGGCCTGACGGTCAAAATGTGAGGGATCATGCTAGCAAATTCTTGGACCTGATGCATTCAGAGGATAGAGAGGGAAAACGAGGACTCGTAGATGCAGTGGTGGATTTTCTTCACAAATCCGGGCTCAAAGAGGAGGCCGGTTCGGTTTGGGAGGTGGCTGCACAAAGAAATGTATATCCAGATGCTGTGAAGGAGAAAAGCCGCTGTTACTGGCTTATAAATCTTCATGTCATGTCTGATGGAACCGCCGTAACCGCATTGTCGAGGACACTTGCTTGGTTTCGCAGAGAGATGCTGGTATCTGGTGTTAGCCCTAACCGAATAGATATTGTGACTGGATGGGGCAGAAGGAGCAGGGTCACAGGTTCTTCTCTTGTGAGACAGTCGGTGCATGAACTGTTGCGTCTATTCAGTTTCCCTTTTTTCACTGAAAATGGAAATTCAGGTTGTTTTGTAGGTTGTGGGGAGCCTCTTAGTGAATGGTTGCACCACTCTTACGTGGAGCGAATGCATTTACTCTAG 2649 0.4364 MQNMLRSKPISTFSSSARSFFFGGTRCNAPDANSCTCNEDETCASVRQQRKKNQDLLAQKPTSIVAKATSQVDGASVSRNPASGTASQKIEGVDQSGSVQQVRSTSGPSSKSNSVSYACVADDSQNHVTQSSPLEGDQIYRAGIAAVNFISDLVNSNLPLSDGMGILSYSKNCMVEPASAIANIRSSNVKKIRKEDFVSVHPRPPVSTQPGPSNNTSSYHGSNGRGDKSKIAKGFQHVASSGTGKSEVAPHIPFNTHDSRPLPPRTRTHSNRFVAKFGNKMQTSNSQMLGSFKESFNRYPRDLKTSAEVASSKTHYAKTGRRDVEVVKDILQQLKWGPATEEALYNLNFFIDAYQGNQVLKQLEDHSVALNFFYWLKRQSGFRHDGHTYTTMVGILGRAREFGAINKLLEQMVNDGCQPNVVTYNRLIHSYGRANYLKEALNVFNQMQEKQCEPDRVTYCTLIDIHAKAGYLDVAMSMYERMQQVGLSPDTFTYSVMINCLGKSGNLAAADRLFCEMVDQGCVPNIVTYNIMIALQAKARNYETALKLYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFVEMKQRNWIPDEPVYGLLVDLWGKAGNVEKAWEWYGAMLSAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQSMVALGLSPSLQTYTLLLSCCTEAQSQYDMGFCCELMKVTGHPAHVFLQSMPAAGPDGQNVRDHASKFLDLMHSEDREGKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQRNVYPDAVKEKSRCYWLINLHVMSDGTAVTALSRTLAWFRREMLVSGVSPNRIDIVTGWGRRSRVTGSSLVRQSVHELLRLFSFPFFTENGNSGCFVGCGEPLSEWLHHSYVERMHLL* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4177 882 Pfam PPR repeat 486 518 IPR002885 -
Mal2g4177 882 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 630 664 IPR002885 -
Mal2g4177 882 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 560 594 IPR002885 -
Mal2g4177 882 SMART SMR_2 779 871 IPR002625 -
Mal2g4177 882 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 455 489 IPR002885 -
Mal2g4177 882 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 385 419 IPR002885 -
Mal2g4177 882 MobiDBLite consensus disorder prediction 210 224 - -
Mal2g4177 882 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 420 454 IPR002885 -
Mal2g4177 882 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 595 629 IPR002885 -
Mal2g4177 882 PANTHER OS03G0856100 PROTEIN 4 882 - -
Mal2g4177 882 TIGRFAM PPR: pentatricopeptide repeat domain 598 631 IPR002885 -
Mal2g4177 882 TIGRFAM PPR: pentatricopeptide repeat domain 457 491 IPR002885 -
Mal2g4177 882 TIGRFAM PPR: pentatricopeptide repeat domain 422 455 IPR002885 -
Mal2g4177 882 TIGRFAM PPR: pentatricopeptide repeat domain 492 526 IPR002885 -
Mal2g4177 882 TIGRFAM PPR: pentatricopeptide repeat domain 527 560 IPR002885 -
Mal2g4177 882 TIGRFAM PPR: pentatricopeptide repeat domain 562 596 IPR002885 -
Mal2g4177 882 TIGRFAM PPR: pentatricopeptide repeat domain 387 421 IPR002885 -
Mal2g4177 882 TIGRFAM PPR: pentatricopeptide repeat domain 633 665 IPR002885 -
Mal2g4177 882 MobiDBLite consensus disorder prediction 198 266 - -
Mal2g4177 882 ProSiteProfiles Smr domain profile. 782 863 IPR002625 -
Mal2g4177 882 SUPERFAMILY SMR domain-like 780 860 IPR036063 -
Mal2g4177 882 PANTHER BNAA07G31720D PROTEIN 4 882 - -
Mal2g4177 882 Pfam PPR repeat 598 627 IPR002885 -
Mal2g4177 882 Pfam PPR repeat 388 417 IPR002885 -
Mal2g4177 882 MobiDBLite consensus disorder prediction 68 115 - -
Mal2g4177 882 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 490 524 IPR002885 -
Mal2g4177 882 Pfam PPR repeat family 524 570 IPR002885 -
Mal2g4177 882 Pfam PPR repeat family 419 465 IPR002885 -
Mal2g4177 882 Pfam PPR repeat family 629 676 IPR002885 -
Mal2g4177 882 Gene3D Tetratricopeptide repeat domain 469 569 IPR011990 GO:0005515
Mal2g4177 882 Gene3D Tetratricopeptide repeat domain 570 686 IPR011990 GO:0005515
Mal2g4177 882 Gene3D Tetratricopeptide repeat domain 351 468 IPR011990 GO:0005515
Mal2g4177 882 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 525 559 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4177 Mal-Chr2 75969826 75973527 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4177 394 815 Glycosyltransferase AT1G05670 21.963 1.72e-22 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4177 - - gmx:100819996 1444.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g4177 2 75969826 75973527 Mal2g4177 2 75969826 75973527 ECH