Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4011 ATGGCCCCAAAATCAGGGAAAGGAAAAACAAATAAAGCAAAGGCAGAGAAGAAGAAAAAGGAAGAGAAAGCAGTAGCACCTTCTCTTGTTGACATTATTGTGTTAACTCCTTATGATTCACAAATTGTATTGAAGGGTATCTCTACTGATAAGATACTTGATGTGAGGAAGCTGTTGGCTGTGAAGGTGGAGACATGCCATTTTACAAACTATTCTTTATCTCATGAGGTTAAAGGTCACAGATTAAATGACAGAGTTGAAGTTGTTACACTAAAGCCATGTCTTCTAAGAATGGTTGAAGAGGATTACAATGAAGAAGCTCAAGCAACTACACACGTGCGAAGACTATTGGACATAATAGCATGCACGACAAGGTTTGGAAAGCCCAAACGTAACTTAACAGGCCCAGACTCATCAAAGCCCAAGAAAAACGGAAAAGCCCAAAACAAGAGCGGTTTGAGCCCACCCGCAACACCGAATGGAGAAACCCGGGTCGGGTCACCGGTGTCGGAACCACCGGCGTCGCCGATTTCGGATAATGTGGGAATGGTGGCGATTCATCCAACGCCGAAGTTGTCAGATTTTTATGAGTTCTTTTCGTTTTCGAATCTCACTCCACCGATTTTGCATTTGAAGAAATGTGAATTTAAGGATGATGACGACAAACGTAAAGGAAATTATTTTCAGCTTCAGGTTAAAATCAGCAATGGGAAAGTAATAGAAGTGGTTGCTTCAGAGAAAGGCTTTTACAGTGTTGGAAAGCTGTCTCTACAGAGTCACACATTGGTTGATCTTCTACAACAGCTCAGCAGAGGTTTTTCCAACGCATATGGATCATTGATGAAAGCTTTTTCGGATCGTAATAAGTTTGGCAATCTTCCATATGGACTTCGATCGAATACATGGCTTGTCGCTCCATCTGTTGGCGAATCTCTTTCAAACTTTCCAGCTCTACCTGCTGAGGATGAAAGCTGGGGTGGTAATGGTGGTGGTCAAGGAAGAAACGGCGAATATGATCATCGACCATGGGCGACAGATTTCTCTATATTGGCTTCTCTTCCTTCCAAAACCGAGGAAGAGAGAGTGATAAGAGATCGAAAAGCTTTTCTGCTTCACAATCAGTTTGTTGATACATCGATATTTAAGGCTGTTGCAGCTATACAGCATGTGATGGAGTCCAAGTCTAGTTTGAATTCTTCTCCGGGTTCAGTTCTGCATCAAGATCAAGTGGGAGACTTGTCCATTGCAGTTGAACGCGGTGGCAATGGAAAGTTTGATTTTACACTGAATGAATCCAGTAAGCATAATGACGATGTTCAGAAGAATTTACTCAAAGGGTTGTCTGCAGATGAAAGTGTCACTGTTAATGATACTTCTTCCTTGGCTGTTGTGGTTGTTCACCACTGTGGATATACAGCAACAGTAAAGGCCATCAGTAATGCGAACACAAGGAAACCCAAAGTTCAGGATATTGAAATAGATGATCAACCAGAAGGAGGCGCAAATGCTCTTAACATCAATAGTTTGAGGGTACTGCTTCACAAATCTGGATCCGATTCATCTGAAGGGACTTTAACTTCCTTGTCAAACTTTGATGACTTGGATGCTTCTAAAGATCTTGTTAAGAAGGTGGTTGAAGAATCCATGGAAAAGATACAGGAAGAGCCAAGTGTTTCACAACGGTCGATTCGATGGGAACTTGGCTCTTCTTGGATGCAGCATCTGCAAAAACAGGAAAATTCAACTGATGTCGGTTCAAATAACAAGGATGGAAGTGATGTTGAGCCAGCTGTGAAAGGTCTGGGAAAGGAATTTAAATTATTGAAGAAGAGGGAAAAGAAACCAAGTGACTTGAGTGGTGCAGATTCTGTGGAGCAAATTAACGATGAGCCAAATAATGATGAATCAAGTAGTTTCAATGAATTAGAGAAGCTACTTTCTAAAGAAGCCTTTTTGCGTCTCAAAGAATCCGGATCTGGTCTTCATATGAAGTCAGTGGATGAGCTTATTAACATGGCACACAAGTTTTATGATGAAGTTGCCTTGCCAAAGCTGGTTACGGACTTTGGATCCCTTGAACTTTCTCCTGTGGATGGTCGTACACTTACTGATTTCATGCATTTAAGAGGATTAAAGATGGGATCTTTGGGTGAAGTGGTTAAACTTGCAGAGAATCTTCCACACATACAATCACTTTGTATTCATGAGATGATTACTCGAGCATTCAAGCATCTACTTAAAGCAATTATTGCTTCTGTCGACAATGTAGCAGATTTACCTTCAGTCATTGCGTCGACACTGAATTTCTTACTTGGAGGGTGTCAACTTGAAGATACGGAACAAACATCAGGCGATGATCATCTAAAAATCCGTTGGTTGCGTACTTTTTTGTCGAAAAGATTTGGATGGACATTAAAAGACGAATTTCAACATTTGAGGAAGTTATCTATTCTCAGAGGGCTCTGTCACAAGGTTGGATTAGAGTTGTTCCCTAGAGATTATGACATGGAGTCGCCTAAGCCGTTTGGAAAGTTTGATATTATCAGCCTTGTTCCTGTGTGCAAGCATGTGGGGTGCTCCTCAATAGACGGACGCAATTTGTTGGAATCATCGAAAATTGCTCTTGATAAAGGAAAGCTTGAGGATGCTGTAAGTTATGGAACAAAGGCATTAGCGAAGATGATGACTGTTTGTGGTCCATATCATCGAAATACTGCAAGTGCGTATAGTCTTTTAGCTGTGGTTCTCTACCACACAGGAGATTTTAACCAGGCCACCATTTATCAGCAAAAGGCGTTGGACATAAATGAGAGAGAGCTTGGACTTGACCATCCAGACACAATGAAAAGCTATGGGGATCTTTCTGTTTTCTATTATCGTCTGCAACATATTGAGCTGGCTCTGAAGTACGTCAACCGCGCTTTATTCCTCCTTCATTTCACATGTGGTCTTTCTCATCCAAATACTGCGGCAACATATATAAATGTGGCTATGATGGAAGAAGGCATGGGAAATGTTCATGTGGCACTTCGGTACTTGCATGAAGCTCTTAAATGCAACAAAAGATTGTTAGGAGCAGATCATATACAGACTGCTGCAAGCTATCACGCCATAGCCATAGCCCTTTCATTGATGGAAGCATATTCTCTGAGTGTGCAACATGAGCAAACTACACTTAAGATACTTCAAGCAAAGCTTGGTGCAGAAGATCTTCGAACTCAGGACGCTGCTGCATGGCTAGAATATTTTGAATCAAAAGCTATAGAGCAGCAAGAAGCAGCTAAAAATGGAACTCCAAAGACAGATACATCCATTGCAAGTAAAGGCCACCTTAGTGTGTCAGATCTCCTGGATTTTATTAATCCTGACAGCGATTCAAAGGGAAATGATGCTCAAAGGAAACAAAGGCGTCCAAAGATACTTCCATTAAGTGATAACAACTCTCAAGAACATGATGATGCTGCAATAGTTGATGATGTCGTGTTCGTTGACAATGCAAAAGATGCCGCAGCAACGGTAGAAGGAAAAATCAAAGAAACAAAAGCCACACATGGAACAGAAGAACCAAAAACAATTGTTGATCTCAGCATGCAAAAGACAGTGGTGACAGTTGAAACTGTTTATGAGACGTCGTCCGATGAAGGTTGGCAAGAAGCCAATTCAAAAGGGAGGTCAGCTAGCGCTGCTAACCGCAAGTCTGGACGCAGACAACGGCCTCTTCTATCAAAGCTCAACGTTAACGGTTCTGATAAACACATTTACAAGGAAGCCAATTATAGGAATGACACTACTTCCCTGCACCAAAAAGCAGCTCCAAAAGTAGCTTCAGCTATGTTATCTCCATCTCGAAAATCAAAAACTCCAAAAGCTTTGTCATCTAAAATTTCATCAACTCCAGCATCATTGAGTTCTTTGGCCTCAAAGTCTATATCTTACAAAGAAGTCGCTGCTGCACCACCAGGTACTGTTTTAAAGCCATTGTTGGAAAAATCCGAGACAGAAAAGGTAAATGATGAAAGTGAGATGCCGAAAAATGAAGGTTCTATCGAAACTTCTAATGCTGATACAGTTCCACAACAAGATGAAAAAGAAACTTCTAATACTGATACAGATCCACAACAAGATGAATCTGAACAAGAAAACTCTGCATCAGAACTCGAGAAAGTTTCCCCTTCATCTGATCAGGCAAAATCTTCCGAAGCAAATGGAAGCAAGCTATCGGCTGCAGCCAAACCATTCAGTCCAGGAACGTTGTCCGCGTCTCGCCATTTAAATCCAGTTCCTCTCGCAAGCATATACGATGCAAATGGGAGTCAAGGCATTCTTGTGGAGCCTGTTCTTCCTCCTGCTGCTGCCAGGGTCCCTTGCGGCCCTAGATCACCGTTGTATTACAGAACCAACTATACTTTCCGCATGAAACACAGTTCAACGAAGATAAGGGAAATAAGTGGATCAGGCGGTCCAAAAATCATGAATCCACATGCTCCCGAGTTTGTTCCAAGAAGTGCTTCTCAGATAGAAACTAGTGAAATCAAGAATAGTACTTCCAAAAGCAGTCTTTCGGAATCCGAGAAGTCAGAGATAGCAAGGCAGATACTGCTGAGTTTTCTAGTGAAATCTGTTCATCAAAATGCTGATGCTGTTGATGAGCCCAAAGTTAGTGAAGGAAAAGTTGAGAACTTTGAAAACTCTTCGGATGAAGTAGCTAAGGATAGTGCTGTAATTAAAATAATGTATGGTACTGAGGAAAAGAATAAGACAGTGGTTAATTCCAGTGATGACAGTGAAGAGCAGGACAATTTAGATGGTGACGGATTTGTAGTTGTCACAAACAGGAGAAAAAGCAGGCAGAAAATCACAAATGGTGTCGCTGAATTGTACAACCAGCCGTCAATTTGTGCTTCGGTTCGTTGA 4914 0.4153 MAPKSGKGKTNKAKAEKKKKEEKAVAPSLVDIIVLTPYDSQIVLKGISTDKILDVRKLLAVKVETCHFTNYSLSHEVKGHRLNDRVEVVTLKPCLLRMVEEDYNEEAQATTHVRRLLDIIACTTRFGKPKRNLTGPDSSKPKKNGKAQNKSGLSPPATPNGETRVGSPVSEPPASPISDNVGMVAIHPTPKLSDFYEFFSFSNLTPPILHLKKCEFKDDDDKRKGNYFQLQVKISNGKVIEVVASEKGFYSVGKLSLQSHTLVDLLQQLSRGFSNAYGSLMKAFSDRNKFGNLPYGLRSNTWLVAPSVGESLSNFPALPAEDESWGGNGGGQGRNGEYDHRPWATDFSILASLPSKTEEERVIRDRKAFLLHNQFVDTSIFKAVAAIQHVMESKSSLNSSPGSVLHQDQVGDLSIAVERGGNGKFDFTLNESSKHNDDVQKNLLKGLSADESVTVNDTSSLAVVVVHHCGYTATVKAISNANTRKPKVQDIEIDDQPEGGANALNINSLRVLLHKSGSDSSEGTLTSLSNFDDLDASKDLVKKVVEESMEKIQEEPSVSQRSIRWELGSSWMQHLQKQENSTDVGSNNKDGSDVEPAVKGLGKEFKLLKKREKKPSDLSGADSVEQINDEPNNDESSSFNELEKLLSKEAFLRLKESGSGLHMKSVDELINMAHKFYDEVALPKLVTDFGSLELSPVDGRTLTDFMHLRGLKMGSLGEVVKLAENLPHIQSLCIHEMITRAFKHLLKAIIASVDNVADLPSVIASTLNFLLGGCQLEDTEQTSGDDHLKIRWLRTFLSKRFGWTLKDEFQHLRKLSILRGLCHKVGLELFPRDYDMESPKPFGKFDIISLVPVCKHVGCSSIDGRNLLESSKIALDKGKLEDAVSYGTKALAKMMTVCGPYHRNTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLKILQAKLGAEDLRTQDAAAWLEYFESKAIEQQEAAKNGTPKTDTSIASKGHLSVSDLLDFINPDSDSKGNDAQRKQRRPKILPLSDNNSQEHDDAAIVDDVVFVDNAKDAAATVEGKIKETKATHGTEEPKTIVDLSMQKTVVTVETVYETSSDEGWQEANSKGRSASAANRKSGRRQRPLLSKLNVNGSDKHIYKEANYRNDTTSLHQKAAPKVASAMLSPSRKSKTPKALSSKISSTPASLSSLASKSISYKEVAAAPPGTVLKPLLEKSETEKVNDESEMPKNEGSIETSNADTVPQQDEKETSNTDTDPQQDESEQENSASELEKVSPSSDQAKSSEANGSKLSAAAKPFSPGTLSASRHLNPVPLASIYDANGSQGILVEPVLPPAAARVPCGPRSPLYYRTNYTFRMKHSSTKIREISGSGGPKIMNPHAPEFVPRSASQIETSEIKNSTSKSSLSESEKSEIARQILLSFLVKSVHQNADAVDEPKVSEGKVENFENSSDEVAKDSAVIKIMYGTEEKNKTVVNSSDDSEEQDNLDGDGFVVVTNRRKSRQKITNGVAELYNQPSICASVR* 1638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4011 1637 Coils Coil 1163 1183 - -
Mal2g4011 1637 Pfam Mitochondrial function, CLU-N-term 49 120 IPR028275 -
Mal2g4011 1637 MobiDBLite consensus disorder prediction 574 589 - -
Mal2g4011 1637 MobiDBLite consensus disorder prediction 1346 1361 - -
Mal2g4011 1637 SUPERFAMILY TPR-like 872 975 IPR011990 GO:0005515
Mal2g4011 1637 Gene3D Tetratricopeptide repeat domain 865 1113 IPR011990 GO:0005515
Mal2g4011 1637 MobiDBLite consensus disorder prediction 1502 1523 - -
Mal2g4011 1637 MobiDBLite consensus disorder prediction 128 180 - -
Mal2g4011 1637 MobiDBLite consensus disorder prediction 1328 1345 - -
Mal2g4011 1637 MobiDBLite consensus disorder prediction 1211 1232 - -
Mal2g4011 1637 MobiDBLite consensus disorder prediction 612 639 - -
Mal2g4011 1637 Pfam Tetratricopeptide repeat 905 975 - -
Mal2g4011 1637 Pfam Tetratricopeptide repeat 989 1063 - -
Mal2g4011 1637 MobiDBLite consensus disorder prediction 1323 1418 - -
Mal2g4011 1637 MobiDBLite consensus disorder prediction 138 165 - -
Mal2g4011 1637 MobiDBLite consensus disorder prediction 1 20 - -
Mal2g4011 1637 ProSiteProfiles TPR repeat profile. 906 939 IPR019734 GO:0005515
Mal2g4011 1637 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 1 1634 IPR027523 GO:0006996
Mal2g4011 1637 SUPERFAMILY TPR-like 943 1061 IPR011990 GO:0005515
Mal2g4011 1637 SMART tpr_5 948 981 IPR019734 GO:0005515
Mal2g4011 1637 SMART tpr_5 990 1023 IPR019734 GO:0005515
Mal2g4011 1637 SMART tpr_5 906 939 IPR019734 GO:0005515
Mal2g4011 1637 MobiDBLite consensus disorder prediction 574 596 - -
Mal2g4011 1637 MobiDBLite consensus disorder prediction 1384 1405 - -
Mal2g4011 1637 Pfam Translation initiation factor eIF3 subunit 135 694 835 IPR033646 -
Mal2g4011 1637 MobiDBLite consensus disorder prediction 1280 1303 - -
Mal2g4011 1637 CDD CLU-central 696 836 IPR033646 -
Mal2g4011 1637 ProSiteProfiles Clueless (Clu) domain profile. 321 586 IPR025697 -
Mal2g4011 1637 MobiDBLite consensus disorder prediction 621 639 - -
Mal2g4011 1637 MobiDBLite consensus disorder prediction 1211 1239 - -
Mal2g4011 1637 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 1634 - -
Mal2g4011 1637 MobiDBLite consensus disorder prediction 1258 1303 - -
Mal2g4011 1637 MobiDBLite consensus disorder prediction 1122 1152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4011 Mal-Chr2 67959851 67971583 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4011 K03255 - gmx:100801625 2336.61