Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4005 ATGGGTGGTGCATGTTCTAGGAAGCAAGAGCGGGATAATGAAGATAATCTTACTAGAGGGTTTTCAAGGAAATATTGCAAATGTGGGAGTTTAAAATGGTGGACATCATCGTTTTCTTATCCATCCATGGATTTACGCACACAAAAAGGAGAATGTCCATCACTGTTGGATTTGTGCATCCAAAAAATAACCGAGGATGTTGATAGACATAACACATTTTCTATGCTGCCACGGGATATAAGTCAGCAAATTTTAAATAATTTGGTTTACTCCCGACGTCTTACTGGTGGTTCTTTTGAAGCTTTTCGAGATTGTGCTCTCCAGGATCTATACTTGGGAGAATATGCTGGTGTTGATGATTCTTGGATGGATGTCATTTCATCTCAGGGTTCATCTTTACTCTCGGTAGATCTTTCTGCGTCTGATGTAACTGATTTTGGATTGACTTATCTTAAAGATTGTCAAAGTCTCATTTCCTTAAATCTAAATTATTGTGACCAAATTTCCGATCATGGACTGGAGTGTATCAGTGGTCTGTCAAACTTGACAAGTTTGAGTTTTAGAAGAAATGATTCAATATCTGCTCAAGGAATGAGTGCCTTCTCTGGTCTTGTAAATTTGGTCAAGTTGGATTTCGAGAGATGTCCTGGGATTCATGGAGGCACTGTTCATCTTCAAGGTTTGACTAAGTTGGAATCTCTCAATATGAAGTGGTGTAATTGCTTAACAGATTCCGATATGAAGCCTCTATCAGAACTTGCAAGCTTGACGAGTCTAGAGATTTCATGTAGTAAAGTCACTGATTTCGGCATCAGTTTTCTGAGAGGATTACAGAAGCTTTCCCTGTTAAATTTGGAAGGGTGCCTTGTAACATCTGCATGCTTGGATTCACTTGCAGAGCTTCCTGCACTGTCAAACTTGAATCTTAATAGATGCAATATTTCTGACAGAGGGTGTGAAAGGTTTTCAAGACTGGAAAAGCTGAAAGTATTAAACTTGGGATTTAATGACATAGGAGATACATGTTTAGCTCATTTGAAAGGATTAACAAAATTGGAGAGCTTGAACCTTGATTCATGTAAGATTGGTGATGAAGGATTGGTGAACTTGACAGGTCATAAGCAATTGATCTGCTTGGAATTGTCTGATACGGAAGTCGGAAACAGTGGCCTGGAGCATTTATCAGGATTGTCTAGTCTGGAGAAAATAAATTTGTCCTTCACGGTTGTAAATGATAGTGGTTTAAGGAAACTGTGTGGACTCTCATCTCTGAAGTCGCTTAATTTGGATGCTTACCAAATTACTGATGCTGGACTGGCGACCCTTACCAGTTTGACTGGCCTCACTGACCTTGATTTATTTGGCGCTCGGATCACAGATGTTGGGACAAATTATTTGAAAAAATTCAAGAATCTGAGGTCCTTGGAAATATGCAGCGGTGGATTGACTGACGCTGGTGTGAAAAATATCAAAGAGCTTTCTTCTCTAATGTGCTTAAATTTATCACAAAACAGCAACCTGACTGACAAAACATTGGAGCTAATTGCTGGGCTCACTTGCTTGGTTTCTTTGAATCTTTCAAATTCTCGCATAACCTCTGCTGGACTGCAGCATTTGAGAACACTGAAAAACTTGAGATCTCTGACATTGGAGTCATGTAAGGTGACAGCAAATGATATAAAGAAATTTAAATCAATACACCTCCCAAACTTGGTAAGCTTTCGACCCGAGTAG 1734 0.3927 MGGACSRKQERDNEDNLTRGFSRKYCKCGSLKWWTSSFSYPSMDLRTQKGECPSLLDLCIQKITEDVDRHNTFSMLPRDISQQILNNLVYSRRLTGGSFEAFRDCALQDLYLGEYAGVDDSWMDVISSQGSSLLSVDLSASDVTDFGLTYLKDCQSLISLNLNYCDQISDHGLECISGLSNLTSLSFRRNDSISAQGMSAFSGLVNLVKLDFERCPGIHGGTVHLQGLTKLESLNMKWCNCLTDSDMKPLSELASLTSLEISCSKVTDFGISFLRGLQKLSLLNLEGCLVTSACLDSLAELPALSNLNLNRCNISDRGCERFSRLEKLKVLNLGFNDIGDTCLAHLKGLTKLESLNLDSCKIGDEGLVNLTGHKQLICLELSDTEVGNSGLEHLSGLSSLEKINLSFTVVNDSGLRKLCGLSSLKSLNLDAYQITDAGLATLTSLTGLTDLDLFGARITDVGTNYLKKFKNLRSLEICSGGLTDAGVKNIKELSSLMCLNLSQNSNLTDKTLELIAGLTCLVSLNLSNSRITSAGLQHLRTLKNLRSLTLESCKVTANDIKKFKSIHLPNLVSFRPE* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4005 577 SUPERFAMILY RNI-like 320 565 - -
Mal2g4005 577 Pfam Leucine rich repeat 302 362 IPR001611 GO:0005515
Mal2g4005 577 Pfam Leucine rich repeat 471 531 IPR001611 GO:0005515
Mal2g4005 577 PANTHER LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 4-LIKE 2 534 - -
Mal2g4005 577 SMART LRR_CC_2 421 445 IPR006553 -
Mal2g4005 577 SMART LRR_CC_2 228 253 IPR006553 -
Mal2g4005 577 SMART LRR_CC_2 301 325 IPR006553 -
Mal2g4005 577 SMART LRR_CC_2 493 518 IPR006553 -
Mal2g4005 577 SMART LRR_CC_2 154 179 IPR006553 -
Mal2g4005 577 SMART LRR_CC_2 349 373 IPR006553 -
Mal2g4005 577 Gene3D Ribonuclease Inhibitor 478 572 IPR032675 -
Mal2g4005 577 Gene3D Ribonuclease Inhibitor 221 299 IPR032675 -
Mal2g4005 577 Gene3D Ribonuclease Inhibitor 87 220 IPR032675 -
Mal2g4005 577 Gene3D Ribonuclease Inhibitor 374 457 IPR032675 -
Mal2g4005 577 Pfam Leucine Rich repeat 398 419 IPR001611 GO:0005515
Mal2g4005 577 Pfam Leucine Rich repeat 180 202 IPR001611 GO:0005515
Mal2g4005 577 Pfam Leucine Rich repeat 154 177 IPR001611 GO:0005515
Mal2g4005 577 Pfam Leucine Rich repeat 229 251 IPR001611 GO:0005515
Mal2g4005 577 Gene3D Ribonuclease Inhibitor 300 373 IPR032675 -
Mal2g4005 577 PANTHER UNCHARACTERIZED 2 534 - -
Mal2g4005 577 SUPERFAMILY RNI-like 118 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4005 Mal-Chr2 67894359 67902951 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g4005 121 427 Receptor kinase-like Gene Family AT5G51350 26.452 1.31e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g4005 - - gmx:100795219 967.222