LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g3595	ATGATTAAGAAGCTTTCTTCTGATGGTTTGTGTGTTGGTGATAGGAAGTTCAATTTTGATAAAGTTTTTGATGCTAACTCCAATCAGGAAGATGTTTTTCAGTCAGTGGGTGTTCCATTGGTTCGAAATGCTTTAGCCGGTTACAACACTTCAATTCTTTCATATGGCCAGTCTGGAAGCGGAAAGACTTATACAATGTGGGGTCCGGCAAGTGCCATGGCTGAGGATCCTTCGTGTCAAAGTCCCCAGGGAATTGTTCCTCGGATCTTCCGAATGTTATTCTCTGAGCTTGAAACAGAGAGACTTATGTCTGACCAGAAACAGTTCAGCTATAAATGTCGTTGTTCTTTTCTTGAGACATACAACGATCAAATTGGGAATTTACTCGATCCAAACCAGCAGAACCTTGAGATGAAGGATGACTCCAAAAATGGACTATTTGTTGAGAATCTGATTGAGGAATATGTCACATGCTATGATGATGTAGCACAAATTCTGATTAAGGGCCTTTCAAGCAGAAGAACCGGAGCAACAAGCTTAAATTCTAATAGCTCTAGATCACATGTCATTTTCACTTTTATCATTGAGTCTTTGTGTAAGGGGACCACAAAGGGTTTCAGTAGTTTAAAAGCTAGCAGAATCAGCCTTATTGATCTTGCCGGATTGGATGGGGATAGTGTTGACGATGGAAGCAATGTAAAGAAATCATTATCTCAGCTTGGGCATTTAGTGGATGCTCTTACTGACAAATCTCAGTCTGGAGAAAATGAAGACATTCCACACAGTAACTCCTGTTTAACTCAATTGCTAAAAGAATCAGTTGGTGGAAATGCTAAACTCTCAGTAATATGTTCCATCTCCCCTGATAACAAGAGCAATGATGAAGCACTCTGCACACTCAGATTTGGGGAGAAAGTAAGATCCATTAGAAACAAGCCAATTATTAATGTAATAAAAGAGGCTGACGATTTGAGTGGTAAAATCCGACATTTGAAGGAAGAACTTATTAGAGTAAAGGCTGGTGGTGTTCATAGCTCAGCTGGGGGTAAAAATGGATGCTTCCAAGGACATAATGTGCGGGAAAGCCTTAATCAGTTGAGAGTCAGCTTAAACCGTTCTCTGCTCCTATCTAACTTCGATAATAATACTGATGAAGCTGTAAATGTCGGCGAGGATGACATAAGGCAATTACACCAGCAAATTGAGGAATTAGATAGTTCATGTGAAGGGAATCCAAAATACATATCTATTGGTGAGGATTGTGTCCAGTTTTATTCTTTTGAGGAAAATTATGATGCCGACACAACCATAGGTGAAGAAAATTCTGTTGGTGATAGCATTTCAGTCATTTCGTGCAGCAAATCTCCAATACTTGACGGACCAGAGTTGTCCGAGTCTCCAAAATTCAGCAATAACCAAAAGAAAAGCGTGGCTTTTTCATCGAGTTATCTGGGAAGTAGGAACAATGTTGCAGAGAGTTCAACTTTTGGGAATCATGTGTTAGGAAAGCCTCCATTACAGTCAAATAAAGCTGAGTCCTTGGCGGAAAGCCTCCAGAGGGGATTACAGATAATTGACTATCACCAACAGAACTCAGCAATGAACAAATCTTCAAGTTCCTTCTCCTTTGGCCGCTTAACTCTGACACCTTGTCCTCAAATTGACAAGGTTGAACCTTATGATCAAACAATACAACAGGAAATTTCTAATGATGAAGTAACTTCCACCTTCTTTTGTGCATCTTGTCGTACAGATTTGACAGATAAAGTTACAAAACATTTGAAAGATGTAATGGAAAAAGGCCACATGAGAGAGAAGGAGCTTGAGAGTGTTTGTAAGGAGCAAGAAGCTAGAATTGAGCAACTAAATCAATTGGTGGAGAAATTGAAAGGAGAGAAAAATCTGAACTCCATTTCTGTGTATGATCAGGGTGAAGAGTATAGCTCCATGAAGGATGGAAACAAGCTTCTGAGGGGCACTTCCTCAAATGGTCATTCACTATATATTATAGAGGAAAAATGCGAAGTTAAAGAAGTCCTAGAAGAGTTAGATGAGAGAGACATCTCTTTTGATTCAACTGAGAAAGAATCACTTCTCAAGGAAATTCAGAGTCTTCGGAGCAAGCTGCAATTATACAGTGATGCGCCCGTCAAAATTTCTACAGAAAAACTGAGAACTTCTTTAATGTCAAGATCCATACAACTGCAAAAAAGTGGTGTATTTTCCCACGATAATAGGAATGAGGAGCTGGAAAACGAAAGACAGAGATGGACAGAAATGGAAAGTGATTGGATTTGTCTTACTGATGATCTTAGAGCTGACCTTGAGTCGTACCGCCAGCGTGCAGAGATGTTGGAAACTGAACTGAAGTTAGAGAAGAAAGGCACAGAAGAGATGGACGATGCACTAAAAAGAGCTGTTAACGGTCATGCTAGAATGGTCGAACACTATAGCGATCTCCAAGAAAAATACAATGACTTGGCTTCTAAGCATGATGCTATGATGGAAGGGATAGCCGAGATGAAGAAGGCAGTCGCAAAAGCCTCGAAAAAAGGTAAAGCACGCTTTGCCAAATCTCTTTCTGCTGAGCTTTCTGCATTGAGGTTGGAGAGGGAAAGGGAGTCGAAATTATTGAGAAAGGATAACCAGTGTTTGAAAATTCAACTTCGAGACACTGCTGAAGCTGTTCAGGCTGCCGGAGAACTACTAGTTAGACTAAGAGAAGCTGAGCAAGCAGCATATGTTGCAGAGGAAAACTTTGCAAATGTGCGACGAGATAATGAAGAGTTAAAAATGCAAGTGGAGAAGCAGAATAGAAAACACAATACAGAGATTAATACCATGAAGCAGTATCTTGCAGGGAGCAAATTGCCAGAGTCTGCATTGAAGCCACTGTATCAAGAGGATTCTGATATGAAACACAACAATACAACCTCTTCCTATACTTATGATGATCATGCATGGAGAGCAGAATTCGGAGCGATATATCAGGAGCATTACTAA	3003	0.4016	MIKKLSSDGLCVGDRKFNFDKVFDANSNQEDVFQSVGVPLVRNALAGYNTSILSYGQSGSGKTYTMWGPASAMAEDPSCQSPQGIVPRIFRMLFSELETERLMSDQKQFSYKCRCSFLETYNDQIGNLLDPNQQNLEMKDDSKNGLFVENLIEEYVTCYDDVAQILIKGLSSRRTGATSLNSNSSRSHVIFTFIIESLCKGTTKGFSSLKASRISLIDLAGLDGDSVDDGSNVKKSLSQLGHLVDALTDKSQSGENEDIPHSNSCLTQLLKESVGGNAKLSVICSISPDNKSNDEALCTLRFGEKVRSIRNKPIINVIKEADDLSGKIRHLKEELIRVKAGGVHSSAGGKNGCFQGHNVRESLNQLRVSLNRSLLLSNFDNNTDEAVNVGEDDIRQLHQQIEELDSSCEGNPKYISIGEDCVQFYSFEENYDADTTIGEENSVGDSISVISCSKSPILDGPELSESPKFSNNQKKSVAFSSSYLGSRNNVAESSTFGNHVLGKPPLQSNKAESLAESLQRGLQIIDYHQQNSAMNKSSSSFSFGRLTLTPCPQIDKVEPYDQTIQQEISNDEVTSTFFCASCRTDLTDKVTKHLKDVMEKGHMREKELESVCKEQEARIEQLNQLVEKLKGEKNLNSISVYDQGEEYSSMKDGNKLLRGTSSNGHSLYIIEEKCEVKEVLEELDERDISFDSTEKESLLKEIQSLRSKLQLYSDAPVKISTEKLRTSLMSRSIQLQKSGVFSHDNRNEELENERQRWTEMESDWICLTDDLRADLESYRQRAEMLETELKLEKKGTEEMDDALKRAVNGHARMVEHYSDLQEKYNDLASKHDAMMEGIAEMKKAVAKASKKGKARFAKSLSAELSALRLERERESKLLRKDNQCLKIQLRDTAEAVQAAGELLVRLREAEQAAYVAEENFANVRRDNEELKMQVEKQNRKHNTEINTMKQYLAGSKLPESALKPLYQEDSDMKHNNTTSSYTYDDHAWRAEFGAIYQEHY*	1001

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal2g3595	1000	Pfam	Kinesin motor domain	14	309	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mal2g3595	1000	ProSiteProfiles	Kinesin motor domain profile.	1	309	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mal2g3595	1000	Coils	Coil	768	795	-	-
	Mal2g3595	1000	PRINTS	Kinesin heavy chain signature	47	68	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mal2g3595	1000	PRINTS	Kinesin heavy chain signature	178	195	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mal2g3595	1000	PRINTS	Kinesin heavy chain signature	259	280	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mal2g3595	1000	PRINTS	Kinesin heavy chain signature	213	231	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mal2g3595	1000	Coils	Coil	314	334	-	-
	Mal2g3595	1000	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	13	318	IPR027417	-
	Mal2g3595	1000	Coils	Coil	906	940	-	-
	Mal2g3595	1000	Coils	Coil	695	715	-	-
	Mal2g3595	1000	Coils	Coil	605	632	-	-
	Mal2g3595	1000	PANTHER	KINESIN-RELATED	9	440	IPR027640	GO:0003777\|GO:0007018
	Mal2g3595	1000	PANTHER	KINESIN MOTOR DOMAIN PROTEIN	478	981	-	-
	Mal2g3595	1000	PANTHER	KINESIN MOTOR DOMAIN PROTEIN	9	440	-	-
	Mal2g3595	1000	SMART	kinesin_4	7	317	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Mal2g3595	1000	Coils	Coil	857	877	-	-
	Mal2g3595	1000	Gene3D	Kinesin motor domain	3	341	IPR036961	-
	Mal2g3595	1000	PANTHER	KINESIN-RELATED	478	981	IPR027640	GO:0003777\|GO:0007018

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g3595	Mal-Chr2	56501405	56506843	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal2g3595	17	341	Miscellaneous Gene Families	AT5G06670	32.440	7.87e-46	175

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal2g3595	K10400		-	gmx:100817066	1358.58

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal2g3595	2	56501405	56506843	Mal8g0325	8	4499605	4504935	PCT