Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g3431 ATGAAGATCACTGTCATGACTTCTGATGAACAAATTCTCAATTTGGATGTTGATCCCAACGAATCTGTTGAAAACGTTAAGGCATTACTTGAGGTTGAGACAAATGTGCCTCTTCAGCAACAACAGATTCTGTTCAATGGGAATGAGGTGAGCAATTCTCAGAAATTGAGTGCACTTGGTGTTAAAGATGATGATTTGCTAATGATGACCGTCTCTGGTGCTGGTGCCGGCGCTGCTGCTTCTAGTGGATCTACCAATGATTTGAGCTTCAATACTGATGGATCAGCTATAAACCCTGGTGCTTTTCAGCAGCACTTTAGACGTGATTCTAATTTGATGGGTCAGCTCTTTCAGAATGACCCGGAGTTAGCACAAGCTATTCTGGGTAATGATCTCAATAAAATCCAGGAAATTTTACGATTGCGTCATCGTCAAAGAAGTCAATTACAGCGTCAAAAAGAAGAAGAGATGGCTCTTCTTTATGCAGATCCTTTTGATGTTGAAGCACAAAAGAAGATTGAAGCCGCCATCCGCCAGAAAGGAATTGATGAAAATTGGGAAGCTGCACTTGAACATAATCCCGAAGCTTTTGCAAGAGTGGTCATGCTGTATGTTGACATGGAGGTTAATGGTGTACCGCTGAAGGCATTTGTTGATAGTGGAGCACAGTCTACCATTATATCAAAAACCTGCGCTGAGCGTTTAGGATTGCTGAGACTTTTAGATCAACGCTACAAAGGAGTTGCTCATGGAGTTGGCCAAACCGAAATATTGGGTAGAATACATGTAGCTCCAATCAAGATTGGGAATATATTTTACCCTTGTTCGTTCTTAGTGCTGGATTCTCCCAACATGGAGTTTCTCTTTGGGCTGGATATGCTCCGAAAGCATCAGTGTATAATTGATTTAAAAGAAAATGTTCTGCGAGTTGGTGGAGGAGAAGTTTCTGTGCCATTTTTGCAAGAGAAAGACATACCGTCTCGGTTTTTAGACGAGGAAAAGTATTCCAAGGAAGCTTCAAGCTCAGGAAGCCCACTCCCAGTTGCATCAGGGAGCAATAATCCATCACAAGGAGGAGGAGCTTCTGGTGACAAGTCTAAGGACTCCGAGTTTGAAAGCAAAGTTGCAAAGCTTGTTGAGCTAGGATTTGAAAGACAAGCAGTTATACAAGCTCTTCAATTATTCAATGGCAATGAGGAACAAGCAGCTGGTTTTCTTTTTGGGTGA 1227 0.4205 MKITVMTSDEQILNLDVDPNESVENVKALLEVETNVPLQQQQILFNGNEVSNSQKLSALGVKDDDLLMMTVSGAGAGAAASSGSTNDLSFNTDGSAINPGAFQQHFRRDSNLMGQLFQNDPELAQAILGNDLNKIQEILRLRHRQRSQLQRQKEEEMALLYADPFDVEAQKKIEAAIRQKGIDENWEAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKTCAERLGLLRLLDQRYKGVAHGVGQTEILGRIHVAPIKIGNIFYPCSFLVLDSPNMEFLFGLDMLRKHQCIIDLKENVLRVGGGEVSVPFLQEKDIPSRFLDEEKYSKEASSSGSPLPVASGSNNPSQGGGASGDKSKDSEFESKVAKLVELGFERQAVIQALQLFNGNEEQAAGFLFG* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g3431 408 CDD RP_DDI 187 310 IPR019103 GO:0004190|GO:0006508
Mal2g3431 408 SUPERFAMILY Ubiquitin-like 1 84 IPR029071 -
Mal2g3431 408 SMART uba_6 371 408 IPR015940 -
Mal2g3431 408 Pfam UBA/TS-N domain 372 405 IPR015940 -
Mal2g3431 408 CDD Ubl_Ddi1_like 1 71 IPR033882 -
Mal2g3431 408 SMART ubq_7 1 72 IPR000626 GO:0005515
Mal2g3431 408 PANTHER ASPARTYL PROTEASE DDI-RELATED 1 407 - -
Mal2g3431 408 ProSiteProfiles Ubiquitin domain profile. 1 76 IPR000626 GO:0005515
Mal2g3431 408 MobiDBLite consensus disorder prediction 339 363 - -
Mal2g3431 408 Coils Coil 135 155 - -
Mal2g3431 408 PANTHER AT13091P 1 407 - -
Mal2g3431 408 Gene3D - 1 85 - -
Mal2g3431 408 Pfam Ubiquitin family 3 71 IPR000626 GO:0005515
Mal2g3431 408 Pfam Aspartyl protease 180 302 IPR019103 GO:0004190|GO:0006508
Mal2g3431 408 Gene3D Acid Proteases 181 327 IPR021109 -
Mal2g3431 408 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 366 408 IPR015940 -
Mal2g3431 408 MobiDBLite consensus disorder prediction 336 369 - -
Mal2g3431 408 SUPERFAMILY Acid proteases 187 303 IPR021109 -
Mal2g3431 408 CDD UBA_scDdi1_like 372 407 - -
Mal2g3431 408 SUPERFAMILY UBA-like 365 408 IPR009060 GO:0005515
Mal2g3431 408 Gene3D - 337 408 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g3431 K11885 - gmx:100779464 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g3431 2 52060842 52072034 Mal2g3431 2 52060842 52072034 ECH