Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2882 ATGGGAGATCCATCGGAGAGGTTAGGATCGGAAGGAATTCACTCCATCGCCGCCGTTAAGACCGACGACTTATCAATGGAAATCGATCCTCCGCCGTTTCAGGAAAACGCTGTAACTGCCGAAGACTGGCGAAAATCTCTCCGCAAAGTCGTTCCCGCCGTCGTTGTTCTTCGTATTACCGCTACTCGTGCATTCGACACTGAATCTGCTTCCGCTAGCTCTGCTACTGGATTCGTTGTTGATAAACGCCGTGGTATTATTCTCACTAATCGCCATGTCGTCAAGCCTGGACCTGTTGTTGCTGAAGCAATGTTTTTGAATCGTGAAGAGGTTCCAGTGCATCCGATATACAGAGATCCAGTACATGATTTTGGGTTTTTTCGGTATGATCCTAGTGCTATACAATTTCTAAACTATGAAGAGATACCTCTTGCTCCTGAAGCTGCTAGTGTTGGATTAGAAATCAGAGTTGTTGGAAATGATAGTGGTGAGAAGGTTTCCATTTTGGCTGGTACTCTTGCTCGTTTGGATAGGGATGCTCCTCACTATAAGAAGGATGGGTATAATGACTTCAACACATTCTATATGCAAGCAGCATCTGGGACCAAAGGAGGGTCAAGTGGTTCCCCGGTTATAGATTGGCAAGGCAGGGCTGTTGGCCTGAATGCTGGGAGCAAGACAACAAGTGCATCAGCATTCTTTTTACCTCTAGAACGAGTTGTGAGGGCATTAAAGTTTCTTCAAAAGGGGAGTGAAACTTATGTTGATAAATGGATGCCAGTTTCTATACCTCGTGGTACTCTTCAGGTGACTTTTCTCCATAAAGGGTTTGATGAGACTCGTCGGCTTGGCCTCAAGAGTGAGACAGAGCAGATAGTACGAAATGCTTCTCCTACCAGTGAAACTGGAATGCTTGTTGTGGAATCTGTGGTGCCAGGTGGTCCAGCATATAAACATTTGGAACCTGGTGATGTACTTGTTCGTGTCAATGGTGAAGTCATTACTCAATTTCTGAAACTGGAGACTATACTTGATGACAGTGTAAACTCAGATATTGAATTACAAATTGAAAGGGGTGGAACATCAAAGAGTTTAACTCTATTGGTGCAAGATTTGCACTCAATAACTCCGAATTATTTCTTGGAAGTTAGTGGAGCAGTAATCCAACCTCTTTCATATCAGCAGGCTAGAAACTTCCGATTCCATTGTGGTCTCGTTTATGTGACAGAACCAGGATATATGCTCTTTAAAGCAGGAGTTCCTCGCCATGCAATAATTAAGAAATTTGCTGGTGAAGAAATATCATGCCTTGAGGAACTAATATCAGTTATTTCTAAGCTATCAAGGGGTGCTCGAGTACCATTGGAGTATATAAGCTACGTGGATCGTCATCGAAGAAAGTCGGTGTTGGTGACGGTTGATCGCCATGAATGGTATGCACCTCCCCGGATTTACACTCGGGATGACAGTACTGGCCTCTGGATTGCTAAGCCTGCTTTTCAGCCTGATTCTCCTTATTTATCATCTGGGGATAAAGATGTTGGAAATCTGGCCAGTCGTCCAAGCGCATTGACCGGTGAGCATGCTTGTGGGGGAGATGCGTGTGAAGGTAACCATCAGGAGTTGGCCGATGGTGTGACTAGCATGGACACTAATTCTGAAGATCCTACAGAGTGTGTATCTCACAACAATGGTTCTGATGGGATAGTCAAAAAACGGAGAGTTGATGATTTATCGACTGATGGGAGTGTTGCTGATATTTCCTTAAATGAACCAGAGGAAACCAAGCTAGAAAAATCAGGTGCCATACAGGATGATGGGTTAATGGACTATCAAGGTGCAACTGCTGCCACAGCAAATGCATCGGTCACTGAACGTGTGATTGAGTCTACCCTTGTGATGTTTGAGGTTCACGTTCCTCCATCTTGTATGCTTGATGGTGTTCATTCACAGCATTTTTTTGGAACTGGTGTCGTAATATATCACAATGAAGATATGGGATTAGTTGCAGTTGACAAGAACACTGTTGCAGTATCTTCCTCTGATGTGTTGCTATCTTTTGCTGCTTTTCCAGTTGAAATTCCTGGAGAGGTGGTATTTCTCCATCCTGTTCACAATTATGCTCTCATATCATATGATCCATCTGCTTTGGGGCCTGTTGGTGCTTCAGTCGTTCGTGCTGCAGAGTTACTTCCTGAGCCATCATTACGTCGAGGAGATTCTGTTTACCTTGTGGGCTTAAGTAGAAGCCTTCAAGCAACCTCTAGGAAATCAGTTGTTACCAATCCTTGCGCTGCTTTAAATATAGGATCTGCAGACTCCCCACGTTACAGAGCGACCAATATGGAAGTTATTGAGCTAGATACTGATTTTGGTAGTTCATTCTCGGGTGTGCTAACAGATGAACAAGGAAGGGTCCAAGCTTTATGGGGAAGCTTCTCTACTCAGCTGAAATTCAGTGGCAGTACATCAGAAGATCATCAATTCGTGAGAGGGATTCCGATTTATGCAATAAGCCAGGTCTTGGACAAGATCATATCTGGTGCAAATGGGACACCTCTTCTCATAAATGGTGTCAAAAGGCCTATGCCACTTCTGAGAATATTAGAAGTTGAACTTTATCCAACATTACTTTCAAAGGCTCGCAGTTTTGGATTAAGTGATGTTTGGATTCAGGCGTTTGTCAAGAAAGACCCAATAAGACGACAGGTTTTACGTGTTAAAGGTTGTTTGGCTGGATCAAAGGCTGAGAATCTTTTGGAGCAAGGGGACATGGTTTTAGCAATCAATAAAGAACCTGTTACATGCTTCCATGACATTGAAAATGCTTGCCAAGCTTTAGATAAATCCGATACCAATGATGGCAAGCTTCAGATGACTATTTTTCGGCAGGGACGAGAGGTTGAACTTCTTGTGGGAACAGACGTTAGAGATGGAAATGGCACAACTCGTACAATTAATTGGTGTGGTTGTATAGTTCAAGATCCACATTCAGCGGTACGTGCTCTTGGATTTCTTCCTGAAGAGGGTCATGGTGTATATGTGGCAAGGTGGTGTCATGGGAGTCCTGTACATAGATATGGTTTGTATGCTCTTCAGTGGATAGTTGAAATTAATGGAAAACCAACTCCAGATATAGATTCTTTTGTTAATGTGACGAAGGAACTACAACATGGAGAGTTTGTTCGGATAAGGACAGTTCACCTTAATGGGAAGCCACGAGTCCTAACATTGAAGCAAGATTTGCACTACTGGCCTACATGGGAATTGAGGTTTAATCCAAACACTGGAATTTGGCATCGTAACGTAATCAAAGCATTGAACTGCAATTCTGTATGA 3339 0.4331 MGDPSERLGSEGIHSIAAVKTDDLSMEIDPPPFQENAVTAEDWRKSLRKVVPAVVVLRITATRAFDTESASASSATGFVVDKRRGIILTNRHVVKPGPVVAEAMFLNREEVPVHPIYRDPVHDFGFFRYDPSAIQFLNYEEIPLAPEAASVGLEIRVVGNDSGEKVSILAGTLARLDRDAPHYKKDGYNDFNTFYMQAASGTKGGSSGSPVIDWQGRAVGLNAGSKTTSASAFFLPLERVVRALKFLQKGSETYVDKWMPVSIPRGTLQVTFLHKGFDETRRLGLKSETEQIVRNASPTSETGMLVVESVVPGGPAYKHLEPGDVLVRVNGEVITQFLKLETILDDSVNSDIELQIERGGTSKSLTLLVQDLHSITPNYFLEVSGAVIQPLSYQQARNFRFHCGLVYVTEPGYMLFKAGVPRHAIIKKFAGEEISCLEELISVISKLSRGARVPLEYISYVDRHRRKSVLVTVDRHEWYAPPRIYTRDDSTGLWIAKPAFQPDSPYLSSGDKDVGNLASRPSALTGEHACGGDACEGNHQELADGVTSMDTNSEDPTECVSHNNGSDGIVKKRRVDDLSTDGSVADISLNEPEETKLEKSGAIQDDGLMDYQGATAATANASVTERVIESTLVMFEVHVPPSCMLDGVHSQHFFGTGVVIYHNEDMGLVAVDKNTVAVSSSDVLLSFAAFPVEIPGEVVFLHPVHNYALISYDPSALGPVGASVVRAAELLPEPSLRRGDSVYLVGLSRSLQATSRKSVVTNPCAALNIGSADSPRYRATNMEVIELDTDFGSSFSGVLTDEQGRVQALWGSFSTQLKFSGSTSEDHQFVRGIPIYAISQVLDKIISGANGTPLLINGVKRPMPLLRILEVELYPTLLSKARSFGLSDVWIQAFVKKDPIRRQVLRVKGCLAGSKAENLLEQGDMVLAINKEPVTCFHDIENACQALDKSDTNDGKLQMTIFRQGREVELLVGTDVRDGNGTTRTINWCGCIVQDPHSAVRALGFLPEEGHGVYVARWCHGSPVHRYGLYALQWIVEINGKPTPDIDSFVNVTKELQHGEFVRIRTVHLNGKPRVLTLKQDLHYWPTWELRFNPNTGIWHRNVIKALNCNSV* 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2882 1112 SUPERFAMILY PDZ domain-like 305 403 IPR036034 GO:0005515
Mal2g2882 1112 SUPERFAMILY PDZ domain-like 1010 1087 IPR036034 GO:0005515
Mal2g2882 1112 Gene3D - 904 978 IPR036034 GO:0005515
Mal2g2882 1112 SUPERFAMILY PDZ domain-like 906 1008 IPR036034 GO:0005515
Mal2g2882 1112 CDD PDZ_serine_protease 281 367 - -
Mal2g2882 1112 ProSiteProfiles PDZ domain profile. 270 371 IPR001478 GO:0005515
Mal2g2882 1112 Pfam Peptidase family M50 297 378 IPR008915 GO:0004222|GO:0006508
Mal2g2882 1112 PANTHER PRO-APOPTOTIC SERINE PROTEASE NMA111 21 1107 - -
Mal2g2882 1112 Gene3D - 985 1083 IPR036034 GO:0005515
Mal2g2882 1112 PRINTS HtrA/DegQ protease family signature 85 97 IPR001940 GO:0004252|GO:0006508
Mal2g2882 1112 PRINTS HtrA/DegQ protease family signature 214 231 IPR001940 GO:0004252|GO:0006508
Mal2g2882 1112 PRINTS HtrA/DegQ protease family signature 319 331 IPR001940 GO:0004252|GO:0006508
Mal2g2882 1112 PRINTS HtrA/DegQ protease family signature 151 175 IPR001940 GO:0004252|GO:0006508
Mal2g2882 1112 PRINTS HtrA/DegQ protease family signature 192 209 IPR001940 GO:0004252|GO:0006508
Mal2g2882 1112 Gene3D - 30 141 IPR043504 -
Mal2g2882 1112 Pfam PDZ domain 306 358 IPR041489 -
Mal2g2882 1112 Pfam PDZ-like domain 982 1058 IPR025926 -
Mal2g2882 1112 Pfam PDZ-like domain 374 447 IPR025926 -
Mal2g2882 1112 Gene3D - 146 259 IPR043504 -
Mal2g2882 1112 SUPERFAMILY Trypsin-like serine proteases 41 246 IPR009003 -
Mal2g2882 1112 SMART pdz_new 882 965 IPR001478 GO:0005515
Mal2g2882 1112 SMART pdz_new 281 360 IPR001478 GO:0005515
Mal2g2882 1112 SMART pdz_new 1001 1070 IPR001478 GO:0005515
Mal2g2882 1112 Pfam Trypsin-like peptidase domain 75 221 - -
Mal2g2882 1112 PANTHER PROTEASE DO-LIKE 7 21 1107 - -
Mal2g2882 1112 SUPERFAMILY Trypsin-like serine proteases 631 847 IPR009003 -
Mal2g2882 1112 Gene3D - 280 373 IPR036034 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2882 Mal-Chr2 38262381 38281556 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2882 K22686 - gmx:100809144 2002.25