Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2848 ATGGAGTCACCACAAGCAAAAAAATCAGGTCTAAACCTCCCAGCAGGGATGTCAACAATAACCTCCCTCCGTCTAGAAACCCTATCAACACCCCCATCCTCCGCTTCGCCTCGTGCAATCTCAAACCTCTCATCAACACCTTCCCCATCAAAATCATCCAAATGCAGTGACAGATTCATACCTTGCAGATCATCTTCAAGACTGCATACATTCGGATTAATCGATAACCCCTCACCGATTAAAGAAGGGAGTAATGAGGCTTATAATAGGTTGTTGAAATCTGAACTTTTTGGATCTGATTTTGCTTCTCCTTCTTCTCCTGCAGGTTGTGGTGATGGTTCGCCGTTGATGAGTCCTAGTAAGAATATGTTGAGGTTTAAGACGGAGAGTTCTGGTCCTTCTTCGCCTTTTTCACCTTCGATATTTGGAAGACATGATGGGTTTTGTAATGAGGGTTCTACTCCTCCTAAGCCTCCTAGGAAAGTTCCCAAGACACCCAACAAGGTTCTGGATGCTCCTTCACTTCAGGATGACTTTTACTTGAATCTTGTGGATTGGTCCTCACAAAATACTCTAGCAGTGGGACTTGGCACTTGTGTTTATCTTTGGAGTGCTTCAAACAGTAAAGTGACTAAGCTGTGTGACTTGGGGCCTTATGATGGTGTCTGTTCTGTTCAGTGGACCAAGGAGGGTTCTTTCATATCCATTGGTACAAACGGTGGTCAAGTTCAGATTTGGGATGGTACTAAATGCAAGAAGGTCAGAACAATGGGAGGGCATCAAACAAGAACTGGTGTCTTGGCATGGAATTCTCGCATTTTGGCTTCGGGAAGCAGGGATAGGAACATACTTCAACATGACATGAGGGTTCCAAGTGACTTCATTGGCAAGCTTGTTGGCCACAAGTCTGAGGTTTGTGGATTGAAATGGTCCTGTGATGACAGGGAACTTGCTTCTGGTGGTAATGATAATCAGCTTTTGGTATGGAATCAGCACTCTCAGCAACCAACTTTGAGACTTACAGAGCACACAGCTGCTGTGAAGGCCATTGCTTGGTCACCTCACCAGAGCAACCTCCTTGTGTCTGGAGGTGGAACTGCTGATAGGTGTATTCGTTTCTGGAACACTACAAATGGCCACCAATTGAACTCCGTTGACACTGGAAGCCAGGTCTGTAACCTTGCTTGGAGTAAAAATGTGAATGAGCTTGTAAGTACTCATGGTTACTCACAAAATCAAATCATGGTGTGGAAATATCCATCACTAGCAAAGGTTGCAACTCTAACTGGCCACAGCATGAGAGTACTATACCTTGCAATGTCACCTGATGGTCAGACAATAGTGACTGGTGCTGGGGATGAGACTCTGCGGTTTTGGAATGTTTTTCCATCAATGAAAACACCTGCCCCAGTTAAAGATACAGGCCTTTGGTCACTGGGCCGCACCCAAATCCGATGA 1458 0.452 MESPQAKKSGLNLPAGMSTITSLRLETLSTPPSSASPRAISNLSSTPSPSKSSKCSDRFIPCRSSSRLHTFGLIDNPSPIKEGSNEAYNRLLKSELFGSDFASPSSPAGCGDGSPLMSPSKNMLRFKTESSGPSSPFSPSIFGRHDGFCNEGSTPPKPPRKVPKTPNKVLDAPSLQDDFYLNLVDWSSQNTLAVGLGTCVYLWSASNSKVTKLCDLGPYDGVCSVQWTKEGSFISIGTNGGQVQIWDGTKCKKVRTMGGHQTRTGVLAWNSRILASGSRDRNILQHDMRVPSDFIGKLVGHKSEVCGLKWSCDDRELASGGNDNQLLVWNQHSQQPTLRLTEHTAAVKAIAWSPHQSNLLVSGGGTADRCIRFWNTTNGHQLNSVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSLAKVATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMKTPAPVKDTGLWSLGRTQIR* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2848 485 ProSiteProfiles Trp-Asp (WD) repeats profile. 428 461 IPR001680 GO:0005515
Mal2g2848 485 CDD WD40 201 460 - -
Mal2g2848 485 PANTHER PROTEIN FIZZY-RELATED 3 9 485 - -
Mal2g2848 485 ProSitePatterns Trp-Asp (WD) repeats signature. 447 461 IPR019775 -
Mal2g2848 485 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 298 330 - -
Mal2g2848 485 ProSitePatterns Trp-Asp (WD) repeats signature. 362 376 IPR019775 -
Mal2g2848 485 SUPERFAMILY WD40 repeat-like 161 461 IPR036322 GO:0005515
Mal2g2848 485 Gene3D - 122 462 IPR015943 GO:0005515
Mal2g2848 485 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 428 461 - -
Mal2g2848 485 ProSiteProfiles Trp-Asp (WD) repeats profile. 298 339 IPR001680 GO:0005515
Mal2g2848 485 PANTHER CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED 9 485 IPR033010 GO:0010997|GO:0097027|GO:1904668
Mal2g2848 485 SMART WD40_4 291 330 IPR001680 GO:0005515
Mal2g2848 485 SMART WD40_4 421 460 IPR001680 GO:0005515
Mal2g2848 485 SMART WD40_4 333 375 IPR001680 GO:0005515
Mal2g2848 485 SMART WD40_4 378 418 IPR001680 GO:0005515
Mal2g2848 485 SMART WD40_4 207 247 IPR001680 GO:0005515
Mal2g2848 485 SMART WD40_4 250 287 IPR001680 GO:0005515
Mal2g2848 485 SMART WD40_4 163 204 IPR001680 GO:0005515
Mal2g2848 485 ProSiteProfiles Trp-Asp (WD) repeats profile. 340 384 IPR001680 GO:0005515
Mal2g2848 485 MobiDBLite consensus disorder prediction 103 137 - -
Mal2g2848 485 Pfam Eukaryotic translation initiation factor eIF2A 324 459 IPR013979 -
Mal2g2848 485 MobiDBLite consensus disorder prediction 28 58 - -
Mal2g2848 485 MobiDBLite consensus disorder prediction 121 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2848 Mal-Chr2 37739034 37742367 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2848 295 461 Miscellaneous Gene Families AT5G08390 20.833 6.09e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2848 K03364 - gmx:547741 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2848 2 37739034 37742367 Mal2g2848 2 37739034 37742367 ECH