Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2840 ATGACTAGTTCCTTAATTTTCTTCTGCTTTTTACTCTCCATCTCTGTCACAGCCACAGGTGTTGTTACGGATGGAAATGGGATGCAACTCATACTCGTAAACAACTGCAAAGAGAGTGTGTGGCCAGGAATTCTGAGCAATGAAGGACACCCTACAATCAAAGATGGCGGATTTCACCTTCCGAGCGGCGAAGAGATTGTTCTCCAACTCCCTAACCATTGGGCAGGTAGAATTTGGGGCAGACAAGGATGTTTCTTCCACGAAAAAACTGGAAAAGGCACATGTCAAACCGGAGACTGTGGAGGCCAATTGAAATGCAAGGGAATTGGTGGTGTCCCTCCAGCTACACTTGTTGAAATGACACTTGGAACCTCACAATCACCTCCACATTACTATGATGTTAGTTTGGTTGATGGATTTAACCTTCCAATGTCAATGAAACCTATTGGTGGTGGTGTTGGTTGTGGCATTGCTTCTTGTCAAGCTGATTTGAATGGTTGTTGTCCATCTCAACTTGTTGTGAAACATGATGGGAAAGTTGTGGGGTGTAAAAGTGCTTGTTTGGCTACAAAATCAGATAAGTATTGTTGCACTGGTGAATTTGCTGATCCAAAAATTTGCAAGCCAACTATGTTTGCTCGTGTTTTTAAGAGTGTTTGTCCTCGTGCTTATAGCTATGCTTATGATGATGCAACAGGGCTTATGAGTTGTTTGGCTAATCGTTATGCCATTACATTTTGCCCTCCATGA 750 0.428 MTSSLIFFCFLLSISVTATGVVTDGNGMQLILVNNCKESVWPGILSNEGHPTIKDGGFHLPSGEEIVLQLPNHWAGRIWGRQGCFFHEKTGKGTCQTGDCGGQLKCKGIGGVPPATLVEMTLGTSQSPPHYYDVSLVDGFNLPMSMKPIGGGVGCGIASCQADLNGCCPSQLVVKHDGKVVGCKSACLATKSDKYCCTGEFADPKICKPTMFARVFKSVCPRAYSYAYDDATGLMSCLANRYAITFCPP* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2840 249 PIRSF PR5 1 249 IPR001938 -
Mal2g2840 249 PRINTS Pathogenesis-related protein signature 77 88 IPR001938 -
Mal2g2840 249 PRINTS Pathogenesis-related protein signature 130 146 IPR001938 -
Mal2g2840 249 PRINTS Pathogenesis-related protein signature 29 41 IPR001938 -
Mal2g2840 249 PRINTS Pathogenesis-related protein signature 238 247 IPR001938 -
Mal2g2840 249 SMART tha2 30 248 IPR001938 -
Mal2g2840 249 Pfam Thaumatin family 34 248 IPR001938 -
Mal2g2840 249 CDD TLP-PA 29 247 - -
Mal2g2840 249 PANTHER PATHOGENESIS-RELATED THAUMATIN FAMILY PROTEIN 4 249 - -
Mal2g2840 249 SUPERFAMILY Osmotin, thaumatin-like protein 29 249 IPR037176 -
Mal2g2840 249 ProSitePatterns Thaumatin family signature. 91 106 IPR017949 -
Mal2g2840 249 ProSiteProfiles Thaumatin family profile. 30 249 IPR001938 -
Mal2g2840 249 PANTHER OS03G0233200 PROTEIN 4 249 IPR001938 -
Mal2g2840 249 Gene3D Thaumatin 29 248 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2840 Mal-Chr2 37608711 37609784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2840 10 248 Receptor kinase-like Gene Family AT5G38280 38.211 6.83e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2840 - - gmx:100809093 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2840 2 37608711 37609784 Mal2g2840 2 37608711 37609784 ECH