Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2700 ATGGCGGCTGCCGCCAACGCTCCGATCCTCATGCGTGAAGCTCTCACCTTGCCAAGCATTGGAATAAATCCACAGCACATAACATTCACGCATGTGACGATGGAATCTGATAAGTATATATGTGTTCGAGAAACCGCGCCGCAGAATAGTGTGGTTATTGTTGATATGAACATGCCAAATCAGCCTCTGAGGAGACCTATTACTGCTGATTCTGCTCTTATGAATCCTAATTCTAGAATTCTTGCTTTGAAAGCTCAACTCCAAGGAACAACTCAGGATCACCTACAAATATTTAATATTGAACTTAAAGCAAAGATTAAATCTTATCAGATGCCTGAGCAGGTAGTCTTTTGGAAGTGGATTAGCCCCAAGTTGTTGGGTCTTGTGACACAGACCTCTGTATACCATTGGTCAATTGAAGGTGACTCTGAACCTGTAAAGATATTTGAGAGAACAGCAAATTTGGCAAACAATCAAATAATTAATTATCGATGTGACCCTACAGAAAAATGGTTGGTCTTGATTGGTATTGCTCCTGGTTCCCCTGAGAGGCCACAATTGGTGAAAGGAAACATGCAACTATTCTCTGTGGAACAACAGCGCAGCCAGGCTCTTGAAGCTCATGCGGCATCATTTGCTCAATTTAAAGTTCCTGGGAATGAAAATCCTTCTACTTTGATCGCTTTTGCCACCAAGACACTTAATGCTGGTCAAGTTATATCCAAGTTGCATGTCATTGAGCTGGGTGCACAGCCAGGGAAACCTACATTTACAAAGAAACAAGCAGATCTGTTCTTTCCCCCTGATTTTGCTGATGATTTTCCAGTTTCCATGCAGATTTCCCACAAATACAGTTTGATTTATGTGATTACCAAACTTGGTCTCCTATTTGTCTATGATTTGGAGACGGCTACTGCTGTATATAGGAACAGAATCAGTCCAGATCCTATATTTTTGACGTCAGAAGCTACATCAGCTGGAGGCTTTTATGCCATTAACAGGAGAGGCCAGGTGTTACTGGCTACGGTTAATGAGCAAACAATTGTGAATTTTGTCAGTGGTCAATTAAACAATTTGGAGCTAGCAGTTAATCTTGCCAAGAGAGGAAACCTTCCTGGTGCTGAGAAGTTGGTAGTAGAACGTTTCCATGAACTATTTGCTCAAACAAAGTATAAAGAAGCAGCTGAGCTTGCTGCTGAGTCTCCGCAAGGAATTCTTCGTACACCCGATACAGTTGCCAAATTTCAGAGTGTTCCTGTTCAAGCTGGGCAAACTCCCCCACTGTTGCAGTATTTTGGAACTCTTTTAACAAGAGGAAAGCTGAATGCCTTTGAATCACTGGAACTGTCACGGCTTGTTGTGAATCAGAACAAGAAAAATCTGTTGGAGAATTGGTTGGCAGAGGACAAGCTTGAGTGCAGTGAGGAGCTTGGAGATCTTGTAAAGACTGTGGACAATGATCTCGCTTTAAAAATATATATCAAAGCCAGAGCTACTCCAAAAGTTGTTGCTGCTTTCGCTGAGAAAAGGGAGTTTGACAAGATTCTGATATACTCTAAGCAGGTTGGATATACACCCGACTATCTCTTCCTTTTGCAAACGATTCTCCGGACTGATCCTCAGGGTGCTGTTAATTTTGCATTAATGCTGTCTCAAATGGAAGGTGGTTGTCCAGTTGATTACAACACCATAACTGATCTGTTTCTTCAGAGAAACCTGATCCGTGAGGCAACTGCCTTTCTCCTAGATGTTTTGAAGCCAAATCTACCAGAACATGGGTTCCTTCAAACAAAGGTGTTAGAGATAAATCTTGTGACTTTCCCCAATGTTGCTGATGCAATTTTGGCTAACGGCATGTTTAGCCACTATGACCGCCCTCGGATTGCCCAACTTTGTGAAAAAGCTGGTCTTTATGTGCGAGCTTTGCAACATTACACAGAGTTGCCAGATATAAAACGTGTGATTGTAAATACACATGCAATTGAGCCACAGTCACTTGTTGAATTTTTTGGTACTCTATCACGAGAATGGGCTTTGGAGTGTATGAAAGATCTATTGCTGGTCAATCTTAGAGGCAACCTACAGATAATTGTGCAGGTTGCTAAAGAATATTGTGAACAACTGGGCGTTGATGCTTGCATAAAGATTTTTGAGCAATTCAGATCATACGAAGGACTGTATTTTTTCCTTGGTTCATATTTGAGCTCCAGTGAGGATCCCGACATTCACTTTAAGTACATTGAGGCAGCAGCAAAGACTGGACAAATCAAAGAGGTCGAGCGTGTGACTAGAGAATCAAGTTTCTATGATCCTGAGAAAACAAAGAATTTTCTGATGGAAGCTAAGCTTCCAGATGCACGACCACTAATTAATGTTTGTGACCGGTTCGGATTTGTTCCAGATCTTACACACTATCTATACACAAGTAACATGCTTCGCTACATTGAGGGTTATGTTCAGAAGGTGAATCCAGGGAATGCTCCTTTAGTTGTTGGGCAGCTGCTAGATGATGAGTGTCCAGAAGATTTTATCAAAGGCTTAATTCTCTCTGTTCGTTCATTACTGCCAGTTGAGCCCCTTGTGGCGGAATGTGAGAAGAGGAATCGGCTTCGTTTGCTCACACAGTTTTTGGAACATCTAGTAAGTGAAGGAAGCCAGGATGTACATGTTCATAATGCACTGGGTAAAATCATCATTGATAGTAACAACAACCCAGAGCATTTTCTCACTACAAACCCATACTATGATTCTCGAGTTGTGGGCAAATATTGTGAAAAACGGGATCCTACTTTGGCAGTTGTGGCTTATAGGCGTGGACTATGTGATGATGAACTTATCAATGTGACAAACAAAAATTCCTTGTTCAAACTACAAGCAAGATATGTTGTTGAGAGGATGGATGCTGACCTTTGGGAGAAAGTTCTTAACCCTGATAATACCTACAGAAGACAACTTATTGATCAAGTTGTATCTACCGCTCTTCCTGAAAGCAAGAGCCCTGAACAAGTATCTGCATCAGTTAAGGCTTTCATGACTGCTGATCTACCTCATGAGTTGATTGAGCTTCTCGAGAAGATTGTGCTTCAGAATTCTGCTTTCAGCGGGAACTTTAATCTTCAGAATCTTCTTATTTTGACAGCGATAAAGGCTGATCCATCTAGAGTAATGGATTACATTAATAGACTGGATAACTTTGATGGTCCTCAAGTTGGAGAAGTGGCTGTTGAGGCTGAGTTATATGAGGAAGCGTTCGCAATTTTCAAGAAGTTTAACTTAAATGTTCAAGCAGTCAATGTCTTGCTAGATAATATTCATAGCATAGATAGAGCTGTGGAGTTTGCTTTCCGAGTTGAAGAAGATGCTGTTTGGAGTCAGGTGGCCAAGGCTCAACTCAGGGAAGGTCTAGTTAGTGATGCAATTGAGTCATTTATACGAGCAGATGATGCCACACAATTTTTGGATGTCATCCGAGCTGCTCAAGATGGCAATGCTTACCAGGACTTGGTGAGGTACTTGCTGATGGTAAGGCAGAAAACAAAAGAACCCAAGGTGGACAGTGAGCTTATTTATGCTTATGCAAAGATTGATAGGCTGAGTGACATTGAGGAGTTCATTCTCATGCCAAATGTGGCCAATCTTCAAAATGTTGGTGACAGATTGTATGATGAAGAGCTATATGAGGCTGCGAAAATCATATTTGCTTTTATATCTAACTGGGCTAAATTAGCAGTCACACTTGTGAAGTTGAAACAGTTCCAAGGTGCTGTTGATGCAGCACGGAAAGCTAACAGTGCAAAAACATGGAAGGAAGTTTGCTTTGCATGCGTTGATGAAGAGGAGTTCCGTTTGGCCCAAATATGTGGGCTGAACATTATCATTCAGGTGGATGACTTGGAAGAGGTAAGTGAATATTACCAAAATAGAGGCTGCTTCAATGAATTAATATCCCTCATGGAGAGTGGCCTAGGATTAGAACGGGCACATATGGGCATATTCACGGAGCTGGGAGTTCTGTATGCTAGATACCGTCCGGAGAAGCTTATGGAGCATATCAAACTATTTGCAACCCGACTCAATATTCCTAAACTCATAAGAGCTTGTGATGAACAACAACATTGGAAGGAACTGACCTATTTGTATATCCAATATGATGAGTTTGATAATGCTGCCACAACCATCATGAACCATTCACCTGAAGCATGGGATCACATGCAATTCAAAGATGTTATTGCCAAAGTCGCTAATGTGGAGCTGTATTACAAGACTGTTCACTTCTATTTGCAAGAGCATCCAGATCTTATCAATGATGTTCTAAATGTCCTTGCACTTCGGGTTGACCATGCACGTGTTGTTGATATCGTGCGAAAGGCTGGTCACCTCCGTCTGGTCAAGCCATACATGGTTGCAGTTCAGAGTAATAATGTGTCTGCTGTTAATGAAGCCTTGAATGGGATATATGTCGAGGAGGAAGACTATGATAGATTGCGCGAGTCAATCGATTTGCATGATAATTTTGATCAAATAGGCCTTGCACAAAAGATTGAGAAGCATGAGCTTCTTGAGATGAGACGTGTTGCTGCTTATATTTACAAGAAGGCAGGTAGGTGGAAGCAGTCCATTGCTTTGTCAAAGAAGGACAACCTTTACAAAGATGCAATGGAAACAGCATCGCAATCTGGTGAACGTGAACTTGCTGAGGAGTTGCTTGTTTATTTCATTGACCAGGGAAAGAAGGAATGCTTTGCCTCGTGTCTGTTTGTTTGCTATGATTTGATCCGGGTAGATGTTGCTCTTGAACTGGCTTGGATGCATAATATGATTGACTTTGCTTTCCCATATCTCTTACAGTTTATCCGTGAGTACACTGGCAAAGTTGATGAACTGGTGAAGCACAAAATTGAATCCCAGAACGAAGTGAAGGCTAAAGAACAAGAAGAGAAGGAAGTAATTGCACAACAGAATATGTATGCTCAATTATTGCCACTTGCTTTGCCTGCACCACCAATGCCTGGAATGGGAGGAGGCTATGCCCCTCCCCCTTCAATGGGTAGCGGAATGGGGATGCCTCCAATGCCTCCTTTTGGCATGCCCATGGGCAGCAGCTACTGA 5109 0.4193 MAAAANAPILMREALTLPSIGINPQHITFTHVTMESDKYICVRETAPQNSVVIVDMNMPNQPLRRPITADSALMNPNSRILALKAQLQGTTQDHLQIFNIELKAKIKSYQMPEQVVFWKWISPKLLGLVTQTSVYHWSIEGDSEPVKIFERTANLANNQIINYRCDPTEKWLVLIGIAPGSPERPQLVKGNMQLFSVEQQRSQALEAHAASFAQFKVPGNENPSTLIAFATKTLNAGQVISKLHVIELGAQPGKPTFTKKQADLFFPPDFADDFPVSMQISHKYSLIYVITKLGLLFVYDLETATAVYRNRISPDPIFLTSEATSAGGFYAINRRGQVLLATVNEQTIVNFVSGQLNNLELAVNLAKRGNLPGAEKLVVERFHELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQAGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLVKTVDNDLALKIYIKARATPKVVAAFAEKREFDKILIYSKQVGYTPDYLFLLQTILRTDPQGAVNFALMLSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVLEINLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYTELPDIKRVIVNTHAIEPQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVDACIKIFEQFRSYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESSFYDPEKTKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYTSNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVAECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDSNNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGLCDDELINVTNKNSLFKLQARYVVERMDADLWEKVLNPDNTYRRQLIDQVVSTALPESKSPEQVSASVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPQVGEVAVEAELYEEAFAIFKKFNLNVQAVNVLLDNIHSIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIESFIRADDATQFLDVIRAAQDGNAYQDLVRYLLMVRQKTKEPKVDSELIYAYAKIDRLSDIEEFILMPNVANLQNVGDRLYDEELYEAAKIIFAFISNWAKLAVTLVKLKQFQGAVDAARKANSAKTWKEVCFACVDEEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMESGLGLERAHMGIFTELGVLYARYRPEKLMEHIKLFATRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAATTIMNHSPEAWDHMQFKDVIAKVANVELYYKTVHFYLQEHPDLINDVLNVLALRVDHARVVDIVRKAGHLRLVKPYMVAVQSNNVSAVNEALNGIYVEEEDYDRLRESIDLHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGERELAEELLVYFIDQGKKECFASCLFVCYDLIRVDVALELAWMHNMIDFAFPYLLQFIREYTGKVDELVKHKIESQNEVKAKEQEEKEVIAQQNMYAQLLPLALPAPPMPGMGGGYAPPPSMGSGMGMPPMPPFGMPMGSSY* 1703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2700 1702 SUPERFAMILY ARM repeat 346 501 IPR016024 -
Mal2g2700 1702 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 701 843 IPR000547 GO:0006886|GO:0016192
Mal2g2700 1702 Pfam Region in Clathrin and VPS 994 1132 IPR000547 GO:0006886|GO:0016192
Mal2g2700 1702 Pfam Region in Clathrin and VPS 851 984 IPR000547 GO:0006886|GO:0016192
Mal2g2700 1702 Pfam Region in Clathrin and VPS 558 691 IPR000547 GO:0006886|GO:0016192
Mal2g2700 1702 Pfam Region in Clathrin and VPS 702 841 IPR000547 GO:0006886|GO:0016192
Mal2g2700 1702 Pfam Region in Clathrin and VPS 1148 1282 IPR000547 GO:0006886|GO:0016192
Mal2g2700 1702 Pfam Region in Clathrin and VPS 1293 1432 IPR000547 GO:0006886|GO:0016192
Mal2g2700 1702 Pfam Region in Clathrin and VPS 1441 1580 IPR000547 GO:0006886|GO:0016192
Mal2g2700 1702 Pfam Clathrin, heavy-chain linker 345 368 IPR015348 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Mal2g2700 1702 Gene3D Tetratricopeptide repeat domain 1058 1197 IPR011990 GO:0005515
Mal2g2700 1702 Gene3D Tetratricopeptide repeat domain 1198 1537 IPR011990 GO:0005515
Mal2g2700 1702 Gene3D Tetratricopeptide repeat domain 903 1057 IPR011990 GO:0005515
Mal2g2700 1702 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1143 1284 IPR000547 GO:0006886|GO:0016192
Mal2g2700 1702 PANTHER CLATHRIN HEAVY CHAIN RELATED 3 1701 - -
Mal2g2700 1702 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 848 987 IPR000547 GO:0006886|GO:0016192
Mal2g2700 1702 Coils Coil 1625 1645 - -
Mal2g2700 1702 Pfam Clathrin propeller repeat 21 57 IPR022365 -
Mal2g2700 1702 Pfam Clathrin propeller repeat 155 198 IPR022365 -
Mal2g2700 1702 SUPERFAMILY ARM repeat 458 794 IPR016024 -
Mal2g2700 1702 SUPERFAMILY ARM repeat 1053 1196 IPR016024 -
Mal2g2700 1702 SUPERFAMILY ARM repeat 902 1068 IPR016024 -
Mal2g2700 1702 SMART CLH_2 552 694 IPR000547 GO:0006886|GO:0016192
Mal2g2700 1702 SMART CLH_2 848 987 IPR000547 GO:0006886|GO:0016192
Mal2g2700 1702 SMART CLH_2 1289 1435 IPR000547 GO:0006886|GO:0016192
Mal2g2700 1702 SMART CLH_2 1143 1284 IPR000547 GO:0006886|GO:0016192
Mal2g2700 1702 SMART CLH_2 1438 1597 IPR000547 GO:0006886|GO:0016192
Mal2g2700 1702 SMART CLH_2 701 843 IPR000547 GO:0006886|GO:0016192
Mal2g2700 1702 SMART CLH_2 994 1139 IPR000547 GO:0006886|GO:0016192
Mal2g2700 1702 Gene3D - 1543 1639 - -
Mal2g2700 1702 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 994 1139 IPR000547 GO:0006886|GO:0016192
Mal2g2700 1702 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1438 1581 IPR000547 GO:0006886|GO:0016192
Mal2g2700 1702 Gene3D - 1 378 IPR016025 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Mal2g2700 1702 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 552 698 IPR000547 GO:0006886|GO:0016192
Mal2g2700 1702 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1289 1435 IPR000547 GO:0006886|GO:0016192
Mal2g2700 1702 PIRSF CHC 4 1688 IPR016341 GO:0016192|GO:0032051|GO:0071439
Mal2g2700 1702 SUPERFAMILY Clathrin heavy-chain terminal domain 6 344 IPR016025 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Mal2g2700 1702 Pfam Clathrin-H-link 370 435 - -
Mal2g2700 1702 PANTHER CLATHRIN HEAVY CHAIN 3 1701 - -
Mal2g2700 1702 SUPERFAMILY ARM repeat 1197 1532 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2700 Mal-Chr2 35082663 35095151 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2700 K04646 - gmx:547986 3164.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2700 2 35082663 35095151 Mal8g1095 8 16794270 16807860 ECH
Mal2g2700 2 35082663 35095151 Mal2g2700 2 35082663 35095151 ECH
Mal2g2700 2 35082663 35095151 Mal8g1095 8 16794270 16807860 PCT