Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2576 ATGGAAAACACCGACGCTTCCTCAGGTTTACACGACTTCCTTGAACGCATGCGTCAACCCACCGCCGCTGATTTCGTCAAAGCAATCAAAAGTTTCATTGTTTCGTTTTCGAATAATGGACCCGATCCTGAGAGAGACAGTGACGCCGTACAAGATTTTCTTGCTAATATGGAAGCTGCTTTCAAGGCTCATCCTCTTTGGTCTGGTTGCTCTGAGGATGAACTCGAAAGTGCCGGTGAAGGTCTCGAGAAGTATGTTATGACAAAGTTGTTTGCCCGTGTATTTGCTTCAGTTCCAGATGATGTAAAACTCGATGACCAACTTTCAGAGAAGATGGCTTTGATTCAACAGTTTATTCGACCAGAAAATTTGGATATCAAGCCAGCATTTCAGAATGAAACATCATGGTTGCTTGCTCAGAAAGAGTTACAGAAGATCAACATGTACAAGTCACCAAGAGACAAACTTACTTGTATCCTAAACTGTTGCAAGGTTATTGGCAACTTGCTGCTTAATGCTTCTCTTGCTTCCAAAGATAATCCTCCTGGAGCTGATGAATTTCTTCCTGTGCTAATCTATGTTACCCTAAAGGCAAACCCTCCACAACTGCACTCAAATCTATTGTACATACAAAGGTTTAGACGCCAATCTCGTTTGGTTGGGGAAGCATCATATTATTTTACAAACATGCTCTCTGCCGAATCCTTCATCTCAAACATTGATGCAAAAGCCATTTCGATGGATGAAACTGAGTTTGAGAGAAACATGGAATTTGCTCGTGCTCTTCATTCAGGGCTTTCAGTTGATACACAAGATCCCAATTCACCTTATCAAAATCATGGACAGCCTCCACGAGCAGATAAAAATAAAGCTCCATCATCTGATGCAAAATTAGAAAGTAAGAAAGTGACTTTTGCAGATGAATTATCAATCACAAAAGTTCCATCACTCTCAGATTTGGAGAATAAAGGGGCAAGTATGATAATTAAGGAGGATAAGTTGAATGATGTTTTCAGGGAGTTTCCATATCTGTTTGCTAGTGTAGGTGATCTAACTGTAAGTGATGTCGAAGACTTGCTAAAGAATTACAAACAATTAGTTTTGAAGTATGCGTGTCTTTCCAAAGGGTTAGGTGTCTCTTCTACATCTCATCTTCCATCCAATCCTCAAAATAATGCTCAGCAGGACCATGTTGAAACCCTTTCCAAAGGGTTAGCCTCCTCTTCTTCATCTCATCTTCCATCCAATCCTCAAAATAATGATCAGGACCATGTTGAGAGTGAGACCACAATAGATTCTTCAGGCGATGGACCTATAGCTTCCAATGACAAATCAAAAAAATCTCCTGAAACATCAGAGGATAACTCAGATCCTGAGGAGAAAAAAAGTGATTCAGGTTTGCCACAGGATGAGGCAGCTGCACCAGAGGGTGGTGCCCCCTCTTAA 1446 0.4101 MENTDASSGLHDFLERMRQPTAADFVKAIKSFIVSFSNNGPDPERDSDAVQDFLANMEAAFKAHPLWSGCSEDELESAGEGLEKYVMTKLFARVFASVPDDVKLDDQLSEKMALIQQFIRPENLDIKPAFQNETSWLLAQKELQKINMYKSPRDKLTCILNCCKVIGNLLLNASLASKDNPPGADEFLPVLIYVTLKANPPQLHSNLLYIQRFRRQSRLVGEASYYFTNMLSAESFISNIDAKAISMDETEFERNMEFARALHSGLSVDTQDPNSPYQNHGQPPRADKNKAPSSDAKLESKKVTFADELSITKVPSLSDLENKGASMIIKEDKLNDVFREFPYLFASVGDLTVSDVEDLLKNYKQLVLKYACLSKGLGVSSTSHLPSNPQNNAQQDHVETLSKGLASSSSSHLPSNPQNNDQDHVESETTIDSSGDGPIASNDKSKKSPETSEDNSDPEEKKSDSGLPQDEAAAPEGGAPS* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2576 481 MobiDBLite consensus disorder prediction 446 467 - -
Mal2g2576 481 ProSiteProfiles VPS9 domain profile. 102 246 IPR003123 -
Mal2g2576 481 MobiDBLite consensus disorder prediction 431 445 - -
Mal2g2576 481 PANTHER BNAC09G47180D PROTEIN 1 400 - -
Mal2g2576 481 MobiDBLite consensus disorder prediction 381 424 - -
Mal2g2576 481 SMART vps9_2 135 254 IPR003123 -
Mal2g2576 481 MobiDBLite consensus disorder prediction 269 299 - -
Mal2g2576 481 Pfam Vacuolar sorting protein 9 (VPS9) domain 138 241 IPR003123 -
Mal2g2576 481 PANTHER RAB GDP/GTP EXCHANGE FACTOR 1 400 IPR045046 GO:0005085|GO:0016192
Mal2g2576 481 MobiDBLite consensus disorder prediction 381 481 - -
Mal2g2576 481 Gene3D VPS9 domain 99 263 IPR037191 -
Mal2g2576 481 Gene3D - 17 97 - -
Mal2g2576 481 SUPERFAMILY VPS9 domain 10 257 IPR037191 -
Mal2g2576 481 Pfam Domain of unknown function (DUF5601) 27 91 IPR041545 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2576 Mal-Chr2 32841719 32845757 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2576 K20131 - gmx:100810958 689.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2576 2 32841719 32845757 Mal2g2576 2 32841719 32845757 ECH