LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g2573	ATGGCTACTTCTCTCTGGAATCAATCTCTTTTGGCTTGTTGTTCATGTTCTTCCACTTCACTCTCTTCAAAATCTCCAAAACAACCCAATTTCGTTCATTTTCCATCTCGCCCCTTTTACGCCTCCAACACTATCTTAGGGTTTCCAACCCCCTTTTCCTCTCTCAATCCAACCTCACTCTTCGCTTCCAAGGATTCCTTTCCAATTACAAATGTTGAAACAGAACAGACTCGGAACAATGAAGATAAAGAACCTTTACCCAGCTTAGTGGTCCTTATTAAAGCATACAAGAAAGCCTTTCTTAACAGCGATGGAAAGACTGCATTGTTGATTGAAGAAATAATACAATCTAAAGCAAATGAGAGGAATAAATTGATTCAAAAAGTAGCTAGTTTATCGGCGGATAAAGTTTCTTGTAAGGAGCAATATCTTCGTTTGCAAGCCGATTTTGATAACTTTAGGAAAAGATGTGACAAAGAAAGAATTAGTATTCAATCGGATGCTCAACAAGAATTTGTTAAAAAACTTCTGTTGATGGTGGACAGTTTTGAGAGAGTCAAACAACAGACTGAAGCGGAAACTGAGAAAGAGAAGAAGATTGATGCGAGTTATCAAAGTCTTTACAAGCAATTTGTAGAGACTTTAAGGAGTCATCATGTATCTGTTGTAGCAACAGTGGGCAAGCCTTTTAATCCCTTGCTACATGAAGCCGTTGCACGTGAGGAGTCCGAAGTGTTTAAGGAAGGGATTATAATTAAAGAATCCCGACGAGGTTTCTTGCTCAAAGATAAGGTTGTAAGGCCAGCGCTTGTGAAGGTTTCCTTAGGTCCTGGGAATAAGAAATCTTCAGTGGCACCTGCCAACTCTTTGGAGCAGCCTTCAAAAGCAGCTAGAATTGATGAAAGATAA	909	0.3938	MATSLWNQSLLACCSCSSTSLSSKSPKQPNFVHFPSRPFYASNTILGFPTPFSSLNPTSLFASKDSFPITNVETEQTRNNEDKEPLPSLVVLIKAYKKAFLNSDGKTALLIEEIIQSKANERNKLIQKVASLSADKVSCKEQYLRLQADFDNFRKRCDKERISIQSDAQQEFVKKLLLMVDSFERVKQQTEAETEKEKKIDASYQSLYKQFVETLRSHHVSVVATVGKPFNPLLHEAVAREESEVFKEGIIIKESRRGFLLKDKVVRPALVKVSLGPGNKKSSVAPANSLEQPSKAARIDER*	303

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal2g2573	302	Pfam	GrpE	113	274	IPR000740	GO:0000774\|GO:0006457\|GO:0042803\|GO:0051087
	Mal2g2573	302	Hamap	Protein GrpE [grpE].	64	275	IPR000740	GO:0000774\|GO:0006457\|GO:0042803\|GO:0051087
	Mal2g2573	302	CDD	GrpE	140	273	IPR000740	GO:0000774\|GO:0006457\|GO:0042803\|GO:0051087
	Mal2g2573	302	Gene3D	-	110	216	IPR013805	-
	Mal2g2573	302	PANTHER	GRPE PROTEIN HOMOLOG	1	292	-	-
	Mal2g2573	302	ProSitePatterns	grpE protein signature.	230	273	IPR000740	GO:0000774\|GO:0006457\|GO:0042803\|GO:0051087
	Mal2g2573	302	PRINTS	GrpE protein signature	144	160	IPR000740	GO:0000774\|GO:0006457\|GO:0042803\|GO:0051087
	Mal2g2573	302	PRINTS	GrpE protein signature	254	273	IPR000740	GO:0000774\|GO:0006457\|GO:0042803\|GO:0051087
	Mal2g2573	302	PRINTS	GrpE protein signature	172	187	IPR000740	GO:0000774\|GO:0006457\|GO:0042803\|GO:0051087
	Mal2g2573	302	PRINTS	GrpE protein signature	227	242	IPR000740	GO:0000774\|GO:0006457\|GO:0042803\|GO:0051087
	Mal2g2573	302	Coils	Coil	115	135	-	-
	Mal2g2573	302	SUPERFAMILY	Head domain of nucleotide exchange factor GrpE	221	275	IPR009012	GO:0006457
	Mal2g2573	302	Gene3D	Head domain of nucleotide exchange factor GrpE	220	274	IPR009012	GO:0006457
	Mal2g2573	302	PANTHER	GRPE PROTEIN	1	292	IPR000740	GO:0000774\|GO:0006457\|GO:0042803\|GO:0051087
	Mal2g2573	302	MobiDBLite	consensus disorder prediction	276	302	-	-
	Mal2g2573	302	SUPERFAMILY	Coiled-coil domain of nucleotide exchange factor GrpE	123	218	IPR013805	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g2573	Mal-Chr2	32820752	32823019	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal2g2573	K03687		-	gmx:100809893	343.199

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal2g2573	2	32820752	32823019	Mal2g2573	2	32820752	32823019	ECH